Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0022 ATGTGGAAGTGGAAGGCGAGGGAACGTGAACCGAGGAAGAGAGGAGGTGGTCAAGAGCAAGAGGTCGGGGTCAGCCTGGATCCCCCTGCTCTCTCTCATCGTCGTTCCCCCCATCCCAATTCCCAATCAAGCGCAGGTGTCTCCCAGACTCACCGACCTTCCGATCCATTTTCATCTTGGTTTATGAGCTCGAAGGAGAGACCCACTCTTGGTGGTACGCGGATTAAGACCCGCAAACGGAATATTGCAGCGCCACTGGACCCTGCAGCATTTTCGGATGCAGTGGTCCAGATTTACTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGAGCATTGAGTCCTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTTGAGGTTGTTTTCACTGGGGGGCGTACGCAACCTGGAACTACCAAGCCTGATGAGGGGGAGCGCCATCCTTACTCTATAATTGAGTGTGAGCCAAAGCGTGAAGTCATATCACCATCTGTAATCTACATACAGAAGATTTTGCGGCGGAGGCCTTTTCTTATCAAGAATCTTGAAAATGTCATGCGAAAATTTCTACAGTCCTTGGAGCTTTTTGAGGAAAATGAAAGGAAAAAGCTGGCAATCTTCACAGCACTTGCATTCTCCCAGAAGTTATCTGGTCTCCCCCCAGAAACTGTGTTCCAGCCACTTCTCAAAGATAATCTTGTGGCCAAAGGGCTAGTTCTGTCATTTATAACTGACTTCTTTAAGGAGTATCTGGTTGACAACAGCCTTGATGATCTCATATCAATTCTGAAGCGGGGAAAAGTGGAGGATAATCTATTGGACTTCTTCCCCCCTGCAAAAAGATCTAATGATGCTTTCGCAGATCATTTCAACAAGGAAGGACTGGCAGCCTTGGTGGAGTATAATGAGAAGAAAATCTTTGAGGTAAAACTTAAAGAGATGAAATCTGCTCTGACAACCCAGATAACAGAGGAAACTGATATATCTGAAGTCATCGAAACTGTGAAGCTACGGGTTAGAGATGCTAAGTTACCAGACATAGAGGTTGTGAGAGTTCTGTGGGATGTCTTAATGGATGCTGTTCAGTGGTCGGGGAAAAATCAGCAACAGAATGCAAATGCAGCCCTGCGTCAGGTAAAAACATGGGCGGAATTGTTGAATACTTTTTGCACCAGTGGGAAACTTGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTACGAGGATGCTAAACTGATGAAGCTCTTCCCTGAGATTATTAGGTCTCTTTATGACCAAGATGTGCTGGCAGAAGATACCATTCTTCATTGGTTCCGGAAAGGAACGAACACCAAGGGAAGGCAAACCTTCGTGAAGGCCCTGGAACCTTTTGTTAACTGGTTGGAGGAGGCTGAAGAGGAGGAATAG 1419 0.4609 MWKWKAREREPRKRGGGQEQEVGVSLDPPALSHRRSPHPNSQSSAGVSQTHRPSDPFSSWFMSSKERPTLGGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELVAKSIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHPYSIIECEPKREVISPSVIYIQKILRRRPFLIKNLENVMRKFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFITDFFKEYLVDNSLDDLISILKRGKVEDNLLDFFPPAKRSNDAFADHFNKEGLAALVEYNEKKIFEVKLKEMKSALTTQITEETDISEVIETVKLRVRDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNANAALRQVKTWAELLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILHWFRKGTNTKGRQTFVKALEPFVNWLEEAEEEE 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0022 472 ProSiteProfiles W2 domain profile. 307 472 IPR003307 GO:0005515
Lele05g0022 472 SUPERFAMILY ARM repeat 314 469 IPR016024 -
Lele05g0022 472 FunFam ARM repeat superfamily protein 304 472 - -
Lele05g0022 472 MobiDBLite consensus disorder prediction 1 17 - -
Lele05g0022 472 CDD W2_eIF5C_like 277 465 IPR043510 -
Lele05g0022 472 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 63 472 - -
Lele05g0022 472 Coils Coil 182 202 - -
Lele05g0022 472 MobiDBLite consensus disorder prediction 35 66 - -
Lele05g0022 472 SMART 542_3 386 471 IPR003307 GO:0005515
Lele05g0022 472 MobiDBLite consensus disorder prediction 1 73 - -
Lele05g0022 472 Pfam eIF4-gamma/eIF5/eIF2-epsilon 399 472 IPR003307 GO:0005515
Lele05g0022 472 Gene3D - 303 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0022 Lele-ChrLele05 184976 192422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0022 361 468 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 3.72e-09 57.4