Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0019 ATGATCTCCATTCCTCGAATGGTTTGTCGACGTGCAAAGATTGCATATATTGATAGACCCAAGAATGTATGCTTACTAATTAAACCAGATTCTTTAGCAAGGAACCCTGGTTGGAGCTACTACAAATGCACAAGTGCTGGACGCCTTGTGAGGAAACATGTGGAAAGGGCTTCGCACGATCTAAAATTTGTATTCACGACTCATGTGGAGAAACACAACCATGAAGTGCCCACCGCTAGAAGCAACAATCAAATGAGCTCGAGTGGTGCCTGTGCAGCCAATACATTACCAAAGCCAGAAACTCGAGTCCTAAACACGGCACCTCATTTTGATAGGAAGCCTGAATTTAGCTGTTTTATGGGAGGTTTTGGTGATGCGATGAAATTCGGGACCTCCTTCATATACCCTAAACCCTTGAGTAATACCTTGCCTGATGGCTCTTATGAAATGAGTTCTATGCCCCGTGTTCCCCGAGTTCCCGATGAATCTTCGCTCATGTGCAAGTTTTCCTCCGGCTGGACTGAATCTCAATTGTGCAAGACCTATGGGTCCAATCCAGTCTTTTCTTTCAGGGCAGGTGGATACGGTCTTCCTGAGGCCTAA 603 0.4561 MISIPRMVCRRAKIAYIDRPKNVCLLIKPDSLARNPGWSYYKCTSAGRLVRKHVERASHDLKFVFTTHVEKHNHEVPTARSNNQMSSSGACAANTLPKPETRVLNTAPHFDRKPEFSCFMGGFGDAMKFGTSFIYPKPLSNTLPDGSYEMSSMPRVPRVPDESSLMCKFSSGWTESQLCKTYGSNPVFSFRAGGYGLPEA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0019 200 ProSiteProfiles WRKY domain profile. 39 77 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g0019 200 Gene3D WRKY domain 26 78 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g0019 200 SMART WRKY_cls 27 76 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g0019 200 Pfam WRKY DNA -binding domain 39 75 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g0019 200 SUPERFAMILY WRKY DNA-binding domain 38 77 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g0019 200 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 39 90 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0019 Lele-ChrLele05 172848 173678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0019 39 80 WRKY Transcription Factor Family AT5G56270 73.810 1.03e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele05g0019 WRKY 1.8e-05 CL0274