Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0018 ATGACCGGGAAGGCCAAGCCCAAGAAGCACACTTCCAAGGAGATCGCCGCCAAGATCGACGCCGCCACCACCAATAGGGGCGGAGGCAAAGCCGGTCTGGCTGACCGCTCCGGTTCGGAAAAGGGTGGCCACGCCAAGTTTGAGTGCCCCCACTGCAAGACCACAGCCCCTGATATCAAGTCTATGCAGATTCATTACGACGCTCGTCATCCTAAGATCCCCTTTGAGGAGTCCAAGCTCGTGAATCTCCATGCCAGCCATACTCCAGAATCGTCGAAACCTCGCCCCGGCGTTCGTGGTAGCCTTAAGAAGTAA 315 0.5714 MTGKAKPKKHTSKEIAAKIDAATTNRGGGKAGLADRSGSEKGGHAKFECPHCKTTAPDIKSMQIHYDARHPKIPFEESKLVNLHASHTPESSKPRPGVRGSLKK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0018 104 Pfam C2H2 type zinc-finger 46 65 - -
Lele05g0018 104 MobiDBLite consensus disorder prediction 82 104 - -
Lele05g0018 104 PANTHER GEO09665P1-RELATED 1 83 IPR045230 -
Lele05g0018 104 MobiDBLite consensus disorder prediction 1 50 - -
Lele05g0018 104 SUPERFAMILY Expressed protein At2g23090/F21P24.15 29 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0018 Lele-ChrLele05 171776 172090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0018 1 104 C2H2 Transcription Factor Family AT3G02790 75.238 9.70e-55 164