Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0017 ATGGAGGACGGTGGTGACCGCCACATTCTGCTTCCGCCGCCTAATTTCTGGATGGTCGAGGACAACATTTTCCGATCCAGTTTCCCTCGGCATCCCAATTTCCCCTTCCTCCAAACCCTAAATCTTCGATCTATCATATACTTGTGTCCCGAACCATATCCCGAAGAAAATTTGGAATTTCTTCAGTCACAGGACATTCGACTCTTTCAGTTTGGAATTGAGGGAAAGACGGAGATTTCAGTACCTATTCTGAAGGACACTGTCATGGATGCTCTGAAAATCTTAATTGATGTGAGAAATCACCCCCTTTTGATCCATTGCAAACAAGGAAAGCATCGAACAGGTTGCCTGGTGGGTTGCTTAAGAAAATTGCAGAAGTGGTGTTTGTCTTCAGTGTTTGAGGAGTACAACAGATTCGCTGGTGCCAAATCGAGGGTAGCGGATTTAAAATTTATAGAATCGTTTGATATATTATGCCTGAGGCAGTGCCTTTACAGCATCATATACCAGTACCAAGGATATAATTCAACCAAGAGGCGGTTGTTGTATAAAGAAGAGAATTTACAGAAGCCCCAAATGACATCCGTTTAG 591 0.4315 MEDGGDRHILLPPPNFWMVEDNIFRSSFPRHPNFPFLQTLNLRSIIYLCPEPYPEENLEFLQSQDIRLFQFGIEGKTEISVPILKDTVMDALKILIDVRNHPLLIHCKQGKHRTGCLVGCLRKLQKWCLSSVFEEYNRFAGAKSRVADLKFIESFDILCLRQCLYSIIYQYQGYNSTKRRLLYKEENLQKPQMTSV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0017 196 Gene3D Protein tyrosine phosphatase superfamily 9 159 IPR029021 -
Lele05g0017 196 Pfam Tyrosine phosphatase family 10 157 IPR004861 -
Lele05g0017 196 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 169 - -
Lele05g0017 196 PRINTS Plant and fungal dual specificity phosphatase signature 47 60 IPR020428 GO:0016791
Lele05g0017 196 PRINTS Plant and fungal dual specificity phosphatase signature 10 27 IPR020428 GO:0016791
Lele05g0017 196 PRINTS Plant and fungal dual specificity phosphatase signature 66 80 IPR020428 GO:0016791
Lele05g0017 196 PRINTS Plant and fungal dual specificity phosphatase signature 83 97 IPR020428 GO:0016791
Lele05g0017 196 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 11 155 IPR029021 -
Lele05g0017 196 ProSitePatterns Tyrosine specific protein phosphatases active site. 105 115 IPR016130 GO:0016311|GO:0016791
Lele05g0017 196 ProSiteProfiles Dual specificity protein phosphatase domain profile. 15 180 IPR020422 GO:0006470|GO:0008138
Lele05g0017 196 FunFam probable tyrosine-protein phosphatase At1g05000 9 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0017 Lele-ChrLele05 163506 169910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0017 3 192 Protein tyrosine phosphatase (PTP) family AT3G02800 67.895 6.60e-97 278