Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0006 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCACTTCCCACTTCACCTTCGGGTATCAGTAGACGGAAGAACTCTAGAAGAAGACTTGGATCAAGGAGTTCTTCCTTTGACAATTGGAGGGATGAGCCCCTCCATAGAATTCCTGGGAGGCTTTTTCTGAATGGTTCTAGTGAAGTTGCGTCTTTGTTCACTCAACAAGGCAAGAAAGGCACCAATCAAGACGCCATGATTGTTTGGGAGAACTTTTGTTCGAGAAAAGATACCATTTTTTGTGGAGTTTTTGATGGCCACGGTCCATGTGGCCATATGGTTGCAAAAAGAGTGAGGGATTCTCTTCCCCTAAAACTGAGTCCACACTGGGAACTTAATGGAGCTGGTGAAGAAGTCCTCAAGGAGATTAGCATTAATACTACAGGGAGTATGAACTCAGAAGAGGCAGCCTTTGTATCTGCTGATGAGGAATCCAGGGCATCCATTGATTCTGAGGAAATAGAAAAACGCCCTGAGATCTTTCGAGCGCTTAAAGAGTCATTTTTGAGGGCATTTAAGGTTATGGATAGGGAACTGAAGATGCATCCAAGAATTGACTGCTTTTGCAGTGGGACTACAGCAGTGATTCTAGTCAAGCAAGGTCTCGACCTTGTTATTGGAAATGTTGGTGACTCTAGAGCTATTCTGGGTACAAGAGACAAAGATGATTCTCTTACAGCGGTTCAACTAACAGTTGATCTGAAACCCAATCTTCCAGCCGAAGCAGAGAGAATTCGCAAATATAAAGGGCGTGTTTTTGCTCTTCAAGATGAACCTGAGGTTGCCCGAGTCTGGTTGCCCAACAATGATGCCCCTGGCCTAGCCATGGCGCGGGCATTTGGAGATTTTTGTCTTAAAGATTTTGGGCTAATTTCTGTTCCAGAGGTATCCTATCGACGCCTCACTAAGAAGGATGAATTTGTTGTCTTGGCAACAGATGGGATTTGGGATGTACTCTCAAACAAAGAAGTTGTTGACATCATAGCAGCATCACCGGCACGTTCTTCCGCAGCCAGAGCGCTGGTTGAGTCAGCAGTTCGAGCTTGGAGATATAAATACCCAACTTCCAAGGTGGATGATTGCGCTGTTGTTTGCCTCTTTCTTGACTCTGAGTCACCAAAATTATCTAGTGCATCTCACATTAATTCTAAAGAGCAGCTTAGTTTAGGAAACCAAATCGACCCAGATAAAGGTATTTCTGGACCAACTGTTCTGGAAAGGTCAGGAACTTGCCGGGCAGACAATGAAAAGTCCCAGGAAGAAAGCCATGAAGAGTCAAAGGAGATAGATGCTGAGTTGGAAAAAGAGTGGTCTGCTCTTGAAGGAGTTTCTCGGGTAAACACACTATTGAATCTCCCAAGATTTGTCCCCGGTGAAGAAGACGACAAGGCCGAGGCTGGGATTAGGAGACGCAAATGA 1452 0.4539 MGSCFSAESRSPLPTSPSGISRRKNSRRRLGSRSSSFDNWRDEPLHRIPGRLFLNGSSEVASLFTQQGKKGTNQDAMIVWENFCSRKDTIFCGVFDGHGPCGHMVAKRVRDSLPLKLSPHWELNGAGEEVLKEISINTTGSMNSEEAAFVSADEESRASIDSEEIEKRPEIFRALKESFLRAFKVMDRELKMHPRIDCFCSGTTAVILVKQGLDLVIGNVGDSRAILGTRDKDDSLTAVQLTVDLKPNLPAEAERIRKYKGRVFALQDEPEVARVWLPNNDAPGLAMARAFGDFCLKDFGLISVPEVSYRRLTKKDEFVVLATDGIWDVLSNKEVVDIIAASPARSSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSESPKLSSASHINSKEQLSLGNQIDPDKGISGPTVLERSGTCRADNEKSQEESHEESKEIDAELEKEWSALEGVSRVNTLLNLPRFVPGEEDDKAEAGIRRRK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0006 483 MobiDBLite consensus disorder prediction 421 443 - -
Lele05g0006 483 FunFam probable protein phosphatase 2C 33 55 382 - -
Lele05g0006 483 SUPERFAMILY PP2C-like 51 380 IPR036457 -
Lele05g0006 483 MobiDBLite consensus disorder prediction 1 21 - -
Lele05g0006 483 Pfam Protein phosphatase 2C 171 357 IPR001932 -
Lele05g0006 483 CDD PP2Cc 60 379 IPR001932 -
Lele05g0006 483 PANTHER PROTEIN PHOSPHATASE 36 377 - -
Lele05g0006 483 MobiDBLite consensus disorder prediction 1 36 - -
Lele05g0006 483 Gene3D - 56 381 IPR036457 -
Lele05g0006 483 MobiDBLite consensus disorder prediction 397 443 - -
Lele05g0006 483 ProSiteProfiles PPM-type phosphatase domain profile. 60 379 IPR001932 -
Lele05g0006 483 SMART PP2C_4 51 377 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0006 Lele-ChrLele05 59990 63945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0006 1 470 PP2C-type Phosphatase Gene Family AT3G02750 61.321 0.0 592