Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1995 ATGAACAACAATCTGGCATTTCTTGCAAGAACTGTTGCAACGAAATTTCATAGCCCATCTTCATTGAGAATTTATTGTTCATCCTCCTCAGCATCTTCTCCTCCTTCCAGCAATAAACTCTTTGTCGGAGGGTTGTCATGGTCCGTGGATGAGAAGTCGCTCAAAGATGCTTTCTCTTCATTTGGTGAAGTCACTGAAGTGAGGATAGCATATGATAAAGACAGTGGTAGGTCTAGAGGGTTTGGATTTGTCATATTTTCGGATGAAGATCGTGCCAAAACTGCAAAAGACGCCATGGATGGCAAGGCACTCTTAGGAAGACCCTTGAGAATAAATTTTGCTCTTGAGAAGGTGCGTGGGGTACCTGTTGTAGTTCCTCGGATCTCAAATATTGGACACATAAATCGGCGCAGCAGTTGGTCTAAAACTCGATGA 435 0.4322 MNNNLAFLARTVATKFHSPSSLRIYCSSSSASSPPSSNKLFVGGLSWSVDEKSLKDAFSSFGEVTEVRIAYDKDSGRSRGFGFVIFSDEDRAKTAKDAMDGKALLGRPLRINFALEKVRGVPVVVPRISNIGHINRRSSWSKTR 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1995 144 SUPERFAMILY RNA-binding domain, RBD 30 134 IPR035979 GO:0003676
Lele04g1995 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 110 IPR000504 GO:0003723
Lele04g1995 144 Gene3D - 16 119 IPR012677 -
Lele04g1995 144 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
Lele04g1995 144 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 21 117 - -
Lele04g1995 144 SMART rrm1_1 39 112 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1995 Lele-ChrLele04 24602547 24606256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1995 30 117 C2H2 Transcription Factor Family AT2G19380 36.364 3.45e-13 63.9