Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1987 ATGGTACCCAGACTCGGGTTTCCACTTCTCTTGCTATTGTTATTTTCACTTTGTTACAACGCAGAATCGAAGTGCAAGAAACGATGCGACTTGGCTTTAGCCTCCTACTATGTTTCAGACCAACTTGAAAATCTTACCTACCTTTCGCAGATTATGCAATCCCCGATTCTTCAAAACCCTGAAGATATCCTCAGCTATAACAATGGCACAATAACTAACAAAGATTTTATCCCAAGGAACATTCGAGTGAACGTTCCATTCCCTTGCGACTGCATCGATGGGGAAAATCTAGGTTACGTATTTAAGTACCCAATTCAGAAAGGGGACACCTATTTGAAGATTGCGAATGGGACCTATTCCAATTTGACTACTGATTCGTCGTTGCAGAGCTTGAATGGGTATTCGCCGAACAATATTCCTGATTATGTAAATCTCGATGTGGCGGTGAACTGTTATTGTGGGAATAGCCATGTTTCGAAAGATTATGGGTTGTTCATCACTTACCCACTTAGAGCTGAGGATTCTTTGGATTCAATTGCGAACCAGACGAAGATTGATAAAGGGTTGCTGCAGAGTTATAATCCTGGTGTTGATTTCAACAAAGGGAGTGGGTTGGTGTATATACCCGGAAAAGCACAAAAGAAGAAGGAGGAGGAGAAAAAGTTGCTTTCAGGCGAATTAGCAGTCTACTCTTCTCATCCTGGGAAAGATTCCAATGGTCCTCCTACTTCTGTTGATACCAACAATGGCATTACTGTGGACAAATCGGTGGAGTTCTCATATGAAGAACTAGCTCAAGCCACAAATGACTTCTGTTTGGCAAATAAAATTGGTCAAGGTGGTTTTGGGGCCGTCTACTATGCAGAGCTGAGAGGGGAGAAAGCTGCAATAAAAATGATGGAGTCGCAGAAGTCAAAACAGTTTCTTGCTGAATTGAAAGTGTTAACACGTGTTCATCACCTAAACCTGGTACGCTTGATTGGATATTGTGTTAAGAAGGATTCTCTTTTCCTTGTATATGAATACATTGACAATGGAAACTTAAGCCAACAACTGCAAGATTCAGGGAGAGAAACATTGCCATGGTCTACACGGTTGCAAATTGCTCTAGATTCAGCTAGAGGTCTTGAATACATTCATGAACATACACAGCCTGTATATATTCATCGTGACATAAAGTCGGCTAACATATTGATAGATCGAAACTTCTGTGCAAAGGTTGCAGATTTTGGGTTGACCAAGCTCACTGAAGTGGGAAGTTCATCAATTCCCACTCGCAATATTGCAGGCACATTTGGTTATATGCCACCCGAATATGCATATGGTAGTGTTTCACCAAAAATCGACGTCTATGCATTTGGAGTTGTTCTTTATGAACTTATATCTGCTAAAGAAGCTGTGTTGAGGGTTGGTGAAGCTGGTTCTGTAACAACAAGAGGCCTTGTCTCTTTGTTTGAAGAAGCTCTTGAGAAGCCTAATCCTAAAGAACATCTTCAAAAGCTTGTTGATCCTAGGCTCGGTGACCAATACGCAATTGATTCAGTTTACAAGATGGCACAAGTAGCCAAAATGTGCACAGAGGGAGACCCAGAGCGACGTCCAAGTATGAGATCTATTGCGGTGTCTCTAATGACACTTTCTTCTACTTCTGTGGAATGGGATATTGCTTCATTGCATGAAAATCCAACATTCGTAAATATGATGTCTGCAAGTTAG 1716 0.4132 MVPRLGFPLLLLLLFSLCYNAESKCKKRCDLALASYYVSDQLENLTYLSQIMQSPILQNPEDILSYNNGTITNKDFIPRNIRVNVPFPCDCIDGENLGYVFKYPIQKGDTYLKIANGTYSNLTTDSSLQSLNGYSPNNIPDYVNLDVAVNCYCGNSHVSKDYGLFITYPLRAEDSLDSIANQTKIDKGLLQSYNPGVDFNKGSGLVYIPGKAQKKKEEEKKLLSGELAVYSSHPGKDSNGPPTSVDTNNGITVDKSVEFSYEELAQATNDFCLANKIGQGGFGAVYYAELRGEKAAIKMMESQKSKQFLAELKVLTRVHHLNLVRLIGYCVKKDSLFLVYEYIDNGNLSQQLQDSGRETLPWSTRLQIALDSARGLEYIHEHTQPVYIHRDIKSANILIDRNFCAKVADFGLTKLTEVGSSSIPTRNIAGTFGYMPPEYAYGSVSPKIDVYAFGVVLYELISAKEAVLRVGEAGSVTTRGLVSLFEEALEKPNPKEHLQKLVDPRLGDQYAIDSVYKMAQVAKMCTEGDPERRPSMRSIAVSLMTLSSTSVEWDIASLHENPTFVNMMSAS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1987 571 SUPERFAMILY Protein kinase-like (PK-like) 254 543 IPR011009 -
Lele04g1987 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Lele04g1987 571 SMART serkin_6 271 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1987 571 Pfam Protein tyrosine and serine/threonine kinase 273 541 IPR001245 GO:0004672|GO:0006468
Lele04g1987 571 ProSitePatterns Protein kinases ATP-binding region signature. 277 298 IPR017441 GO:0005524
Lele04g1987 571 FunFam PTI1-like tyrosine-protein kinase 3 343 557 - -
Lele04g1987 571 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 215 557 IPR044812 GO:0019199|GO:0045087
Lele04g1987 571 Gene3D Transferase(Phosphotransferase) domain 1 343 560 - -
Lele04g1987 571 ProSiteProfiles Protein kinase domain profile. 271 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1987 571 Gene3D Phosphorylase Kinase; domain 1 243 342 - -
Lele04g1987 571 FunFam LysM receptor kinase 2 250 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1987 Lele-ChrLele04 24510415 24519870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1987 11 570 Receptor kinase-like Gene Family AT3G21630 53.896 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele04g1987 PK_Tyr_Ser-Thr 2.2e-46 CL0016