Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1986 ATGAAAAAGAAAATCTCCCACAACCCAATTATTTCAAAGCTTCCTTCACTCTCTCTGCTTATTCATTCAGCGCACTCATTCCATTTGAGGATTTGCATTTTTCCCTCAGCTTTTTCAGCACGACCATATATACAAATGTTACTCAGATTCGGGTTTCCACTTCTCTTCTTCTTGTTATTTCTCTCTCTCTGTCTCAATGCAGAATCCAAGTGTAAGAAAGGATGTGACTTGGCTCTTGCCTCCTACTACATTTGGGTCGGCTATCCAAATATCACATACTTTCCGCAGATCATGAGATCTCCAGTTCTTCAAAGATCTCAAGATATCATCGGCTATAACAAAGACCAATTATTAAACGAAAACTATGTCGAAACCGGCGCTCAAGTGCACGTTCCGTTCCCTTGCGATTGCATCGATGGCGAATATCTAGGTTATGTATTCAAGTACCAAATTCAGAAAGAAGACACCTATAAGTTGGTTGCGAATCAGAAGTATGCCAATTTGACCACCGTTTCGATGTTGGAGATTGCGAATAGCTATTCACCGGAGAATATTCCTGATCATGGAACGCTCAATGTGACGGTGAAATGTTCGTGTGGGGATAGCCGCGTTTCGAAAGAGTATGGGTTGTTCGTCACTTACCCTCTTAGAGCTGAGGATTCTTTGGATTCCATTGCGAACCAGACGAAGCTTGATCGATCATTGCTTCAGAGGTATAATCCTGGTGTTGATTTCAACAAAGGGAATGGTGTGGTGTTTATCCCGGGAAAAGACCTAAATGGTGTTTATGCGCCAATGCCCCCTAGAACAAAAGGTCTAAAAGGTGCGGCTATTGCTGGATTATCTGCTGGAGCAGTAGCTGTGTTTCTCTTAGTGGCAACTTGTATGTATGTTGCATATTACCATAGGAAGAAGGAGGAGGAAAAGTTGCTTTCTGGGGATGCTCAAATTGGGAATGATTCCAACGGTCCTCCTGCTGCTACTACTGGCGGCAAAGGTATTACTGTGGAAAAGTCAGTGGAGTTCTCATATGGCGAACTAGCTCGAGCGACAAGAAACTTCAGTATGGCAAATAAAATTGGTGAAGGTGGTTTTGGGGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCAGTTAAAAAGATGAAGTCACAAGATACGAAAGAGTTTCTTGCTGAATTGAAAGTGTTGACGCATGTTCATCACCTGAACCTGGTACGCTTGATTGGATATTGCGTTAAGGGGCATTTTCTTTTCCTTGTATATGAATATATTGATAATGGAAACTTAAGCCAACACCTACGAGATTCAGGGAGAGAACCCTTGTCATGGTCAATGAGAATGCAAATTGCTTTGGATTTGGCCAGAGGTCTTGAATACATTCATGAGCATACGGTGCCTGTATGTGTTCATCGTGACATAAAGCCAGCTAATATATTGATAGACAGAAACTTCTGTGCAAAGGTTGCAGATTTTGGGTTAACCAAGCTCATTGAAGTGGGAAATTCACCACATCTCTCTGAAAACATTGCAGGCACATTTGGTTATATTCCACCCCTGAATGATGGTGGTGTTAAAACCGATGTCTATGCTTTCGGAGTTGTTCTCTATGAACTTATATCTGCTAACGAAGCTGTGCTTATTGACTATGAAGCTGGTTCTGAAGCAAAAACCCTTGTCTCTTTGTTTGAAGAAGCTCTTGAGCAGCCTAATCCTGAAGAACATCTTCTAAAGCTTGTTGATCCTAGGCTTGAAGGAGAATATTCATTCGATTCAGTTTACAAGATGGTCCAACTAGCCAAGGCTTGCACAGAGGAAAAACCAGACCGACGGCCTAGTATGAGATCTGTTGTGGTGGCTCTAATGACACTCTCTTCTTCTATTGAATAG 1893 0.4226 MKKKISHNPIISKLPSLSLLIHSAHSFHLRICIFPSAFSARPYIQMLLRFGFPLLFFLLFLSLCLNAESKCKKGCDLALASYYIWVGYPNITYFPQIMRSPVLQRSQDIIGYNKDQLLNENYVETGAQVHVPFPCDCIDGEYLGYVFKYQIQKEDTYKLVANQKYANLTTVSMLEIANSYSPENIPDHGTLNVTVKCSCGDSRVSKEYGLFVTYPLRAEDSLDSIANQTKLDRSLLQRYNPGVDFNKGNGVVFIPGKDLNGVYAPMPPRTKGLKGAAIAGLSAGAVAVFLLVATCMYVAYYHRKKEEEKLLSGDAQIGNDSNGPPAATTGGKGITVEKSVEFSYGELARATRNFSMANKIGEGGFGAVYYAELRGEKAAVKKMKSQDTKEFLAELKVLTHVHHLNLVRLIGYCVKGHFLFLVYEYIDNGNLSQHLRDSGREPLSWSMRMQIALDLARGLEYIHEHTVPVCVHRDIKPANILIDRNFCAKVADFGLTKLIEVGNSPHLSENIAGTFGYIPPLNDGGVKTDVYAFGVVLYELISANEAVLIDYEAGSEAKTLVSLFEEALEQPNPEEHLLKLVDPRLEGEYSFDSVYKMVQLAKACTEEKPDRRPSMRSVVVALMTLSSSIE 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1986 630 SMART serkin_6 354 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1986 630 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 55 629 IPR044812 GO:0019199|GO:0045087
Lele04g1986 630 Pfam Protein tyrosine and serine/threonine kinase 356 621 IPR001245 GO:0004672|GO:0006468
Lele04g1986 630 ProSiteProfiles Protein kinase domain profile. 354 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1986 630 FunFam PTI1-like tyrosine-protein kinase 3 426 630 - -
Lele04g1986 630 SUPERFAMILY Protein kinase-like (PK-like) 336 622 IPR011009 -
Lele04g1986 630 Gene3D Phosphorylase Kinase; domain 1 327 425 - -
Lele04g1986 630 FunFam LysM receptor kinase 2 333 425 - -
Lele04g1986 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Lele04g1986 630 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Lele04g1986 630 Gene3D Transferase(Phosphotransferase) domain 1 426 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1986 Lele-ChrLele04 24499425 24509446 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1986 58 628 Receptor kinase-like Gene Family AT3G21630 53.626 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele04g1986 PK_Tyr_Ser-Thr 6.8e-44 CL0016