Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1985 ATGAGAGTGCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATATATTCACGAGCATACTGTGCCCCTATATATTCATCGTGACATAAAGTCAGCTAATATATTGATTGATAGAAACTTCCGTGCAAAGGTTGCAGATTTTGGGTTGACCAAGCTCACTGAAGGGGGAAGTTCAGCACTTCCCACTGATAATCTTGCAGGCACATTTGGTTATATGCCACCTGAATATGCATATGGTAGTGTTTCACCAAAACTTGACGTCTTTGCTTTCGGAGTTGTCCTCTACGAACTCATATCTGCTAAAGAAGCTTTGTTCCGGGCTGGTGAAGCTGGTTCTGATACAAAAGGCCTTGTCACTTTGGTGATTCTTGACTTCCCCTTTGAAGAAGCTCTTGAGAAGCCTAATCCAAAAGAACATCTGCAAAAGCTTGTTGATCCTAGGCTGGGTGACCAATACCCAATAGATTCAGTTTACAAGATGGCACAGCTAGCCCGAGTGTGCACAGATGGAGACCCTGACCGACGTCCAAGCATGAGATCTGTTTTGGTGACTCTAATGGCACTTTCTTCTACTTCTGTGGAATGGGATATTGCCTCCTCCATATATGAATAG 612 0.4379 MRVQIALDSARGLEYIHEHTVPLYIHRDIKSANILIDRNFRAKVADFGLTKLTEGGSSALPTDNLAGTFGYMPPEYAYGSVSPKLDVFAFGVVLYELISAKEALFRAGEAGSDTKGLVTLVILDFPFEEALEKPNPKEHLQKLVDPRLGDQYPIDSVYKMAQLARVCTDGDPDRRPSMRSVLVTLMALSSTSVEWDIASSIYE 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1985 203 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 199 IPR044812 GO:0019199|GO:0045087
Lele04g1985 203 FunFam PTI1-like tyrosine-protein kinase 3 1 199 - -
Lele04g1985 203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Lele04g1985 203 SMART serkin_6 2 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1985 203 Gene3D Transferase(Phosphotransferase) domain 1 1 199 - -
Lele04g1985 203 SUPERFAMILY Protein kinase-like (PK-like) 2 183 IPR011009 -
Lele04g1985 203 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1985 203 Pfam Protein kinase domain 5 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1985 Lele-ChrLele04 24492932 24494766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1985 2 199 Receptor kinase-like Gene Family AT3G21630 61.616 9.21e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele04g1985 Pkinase 5.5e-26 CL0016