Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1974 ATGGACGAAATTGGAAACAAAATCACTGAGATGTTTCAAGGCCAAGCCCAATTGTATAAGGTCATGTACCTTTGGATAACTCCTTTATGCCTAAAGTGTGCCATTGAGCTTGAAATACCATACATAATCCACAAACATGGCCAACCCATCCTTCTTTCTCAATTGATATCAGCTCTCAATGTTCCACCCTCTAAAGCTACCTTTGTGAAAGGGCTCATGAGATTGCTCTCTCATAATGGCCTCTTCACTATCATCAAAAGCAACAACAATGAAGAAGGAAGTGAAGAAGAAGAAGCATATGATCTCACATCTGCATCAAAACTTCTTGTGAGTGACACAGACCATTGTTTATCTCCAATGGTTCAGTTGGCAGTAAAGCCTAGTATGATTGATTTGTATCATCAATTGGGGAAATGGGTTTGTATGAAGGAAAACACAATGGAAGAGACCATGTTTGGTGTGAGGCCTTATGACTTGCTTAAACAAAACCCACCAGATTTGGCATTAATGCAAGAAGCAATGGCTAGTGATTCTAGATTCATGAAACTGGCATTGATTAGAGACTTGAGATCTGTTTTTGATGGATTGGGTTCCATTGTTGATGTTGGTGGTGGAAATGGGGCCACTGCTAAGATTATCAGTGAAGCATTCCCCAAGTTGGAATACATGGTGCTTGATCTTCCTGAAGTTGTAGCAAACTTATCTAGAAACACCAATTTGAGTTTTGTTGGTGGGGACATGCTCAATTTCATCCCTCATGCTGATGCAGTTTTGATTAAGTGGGTTTTACTTGATTGGGGTGATGGGGATTGTATAAAGATACTTAAAAATGCCAAGGAAGCTATATCAGGCAAAGGAAAAGTGATAATCATAGATATGGTGTTGAATGAAAATCAAGACCAGAATGAATGGTTAGAAACAAAGCTCTTGCTCAACATAATTTTGAGTGCACAACTTAATTCAAAAGCAAGATCTGAGGAAGAATGGAAGCAACTGTTCCTGAATTCAGGCTTTAAGGATTACAAGATATTTCCTATACTTGGCCTTAGGTCTCTTATTGTGCTTCATCCTTAG 1074 0.3892 MDEIGNKITEMFQGQAQLYKVMYLWITPLCLKCAIELEIPYIIHKHGQPILLSQLISALNVPPSKATFVKGLMRLLSHNGLFTIIKSNNNEEGSEEEEAYDLTSASKLLVSDTDHCLSPMVQLAVKPSMIDLYHQLGKWVCMKENTMEETMFGVRPYDLLKQNPPDLALMQEAMASDSRFMKLALIRDLRSVFDGLGSIVDVGGGNGATAKIISEAFPKLEYMVLDLPEVVANLSRNTNLSFVGGDMLNFIPHADAVLIKWVLLDWGDGDCIKILKNAKEAISGKGKVIIIDMVLNENQDQNEWLETKLLLNIILSAQLNSKARSEEEWKQLFLNSGFKDYKIFPILGLRSLIVLHP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1974 357 PIRSF O-mtase 2 357 IPR016461 GO:0008168
Lele04g1974 357 PANTHER O-METHYLTRANSFERASE 10 342 IPR016461 GO:0008168
Lele04g1974 357 Pfam O-methyltransferase domain 133 339 IPR001077 GO:0008171
Lele04g1974 357 Gene3D - 3 109 IPR036388 -
Lele04g1974 357 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Lele04g1974 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 353 IPR029063 -
Lele04g1974 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 113 IPR036390 -
Lele04g1974 357 FunFam Coniferyl alcohol 9-O-methyltransferase 3 109 - -
Lele04g1974 357 FunFam O-methyltransferase ZRP4 111 357 - -
Lele04g1974 357 Gene3D Vaccinia Virus protein VP39 110 357 IPR029063 -
Lele04g1974 357 CDD AdoMet_MTases 199 295 - -
Lele04g1974 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 357 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1974 Lele-ChrLele04 24309680 24311157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1974 26 343 Monolignol Biosynthesis Gene Families AT5G54160 29.664 1.74e-39 142