Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1973 ATGAAGAAGGAAAACTCAACAACTCATTTGGCAAACATTCCAATGTCCTCTCCATCCATGGACGAAATTGGAAACAAAATCACTGAGATGTTTCAAGGACAAGCCCAATTGTACAAGGTCATGTATCTTTGGATACCTCCTTTATGTCTAAAATGTGCCATTGAGCTTGAAATACCAGACATAATCCACAAACATGGCCAACCCATCCCTCTTTCTCAGTTGGTGTCAGCTCTCAAAGTTCCACCCTCTAAAGCTACCTTTGTGGAAGGGCTCATGCGCTTGCTCTCTCATAATGGCCTCTTCGCTATCATCAAAAGCAACAACAATGAAGAAGAAACTGAAGAAGTAGCATATGATCTCACTTCTGCAGCAAAACTTCTTGTGAATGGCACAGACCATTGTTTATCTCCAATGATACAGATGGCAGTAGAACCTATTATGATTGATTTGTATCATCACTTAGGGAAATGGGTTCGTCAGAAGGAAAACACGCTGGAAGAGACAATATTTGGTGCTGGGCCTTATGACTTTCTTAAGCAAAACCCAGCTGATTTGGTGTTAGTGCATGAAGCAATGGCTAGTGATTCTAGATTCATGAAAATGGCACTGATCAAAAACTTGGATTCTGCTTTTGATGGATTGGGTTCCATCGTTGATGTTGGTGGTGGAAATGGGACAACAGCCAAGATTATCAGTGAAGCATTCCCCAAGTTGAAATACACAGTGCTAGATCGTCCTGAGGTTGTAGCAAAATTTTCTGAAAGCACCAATTTGAGTTTTGTTGGTGGGGACATGTTCAATTTCATCCCTCATGCTGATGCAGTTTTGATTAAGTGGGTTTTGCTTGATTGGAGTGATGAAGATTGTGTAAAGATACTTAAAAATGCCAAGGAAGCTATCTCAGGCAAAGGAAATGAAGGAAAAGTGATCATCATAGATATGGTGTTGAATGAAAAGCATGACAAGAATGAAATGCTTGAAACAAAGCTCTTATTCAACATAATCATGACAGCTGCGCTTAATTCAAACCAGAGATCTGAGGAAGAATGGAAGCAAATCTTCCTGAAGGCAGGCTTCAAGGATTACAAGATATTTCCTATATTTGGCTTTAGGTCTCTTATTGTGCTTCATCCATAG 1137 0.4002 MKKENSTTHLANIPMSSPSMDEIGNKITEMFQGQAQLYKVMYLWIPPLCLKCAIELEIPDIIHKHGQPIPLSQLVSALKVPPSKATFVEGLMRLLSHNGLFAIIKSNNNEEETEEVAYDLTSAAKLLVNGTDHCLSPMIQMAVEPIMIDLYHHLGKWVRQKENTLEETIFGAGPYDFLKQNPADLVLVHEAMASDSRFMKMALIKNLDSAFDGLGSIVDVGGGNGTTAKIISEAFPKLKYTVLDRPEVVAKFSESTNLSFVGGDMFNFIPHADAVLIKWVLLDWSDEDCVKILKNAKEAISGKGNEGKVIIIDMVLNEKHDKNEMLETKLLFNIIMTAALNSNQRSEEEWKQIFLKAGFKDYKIFPIFGFRSLIVLHP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1973 378 SUPERFAMILY "Winged helix" DNA-binding domain 29 130 IPR036390 -
Lele04g1973 378 CDD AdoMet_MTases 217 316 - -
Lele04g1973 378 Gene3D - 20 127 IPR036388 -
Lele04g1973 378 PANTHER O-METHYLTRANSFERASE 29 363 IPR016461 GO:0008168
Lele04g1973 378 Gene3D Vaccinia Virus protein VP39 129 378 IPR029063 -
Lele04g1973 378 FunFam O-methyltransferase ZRP4 129 378 - -
Lele04g1973 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 378 IPR016461 GO:0008168
Lele04g1973 378 PIRSF O-mtase 15 378 IPR016461 GO:0008168
Lele04g1973 378 Pfam O-methyltransferase domain 151 360 IPR001077 GO:0008171
Lele04g1973 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 133 375 IPR029063 -
Lele04g1973 378 FunFam Coniferyl alcohol 9-O-methyltransferase 21 127 - -
Lele04g1973 378 Pfam Dimerisation domain 49 96 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1973 Lele-ChrLele04 24304155 24305792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1973 47 364 Monolignol Biosynthesis Gene Families AT5G54160 29.091 6.43e-38 138