Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1958 ATGCAAATACAAGGTTCAAGCCAAGCTCAGCCTTTTGCTTCATCACCATTAGTGAAAAGTGAGATGGCAATGTCGTCATATGAATTAATTTTATCATCCCTTGGTCAAATTATTTGTTCAGGGGCTAGTGCTCCCGTTGAAGCCGATATGGATGGATCTAACCCTAGAGTTGTAGATAATAATGTGCTTCAAGCTTCACAGGTTGAAGTAAGAGGCAGGGGTGTCTCAGTTCCTATCGAAAGATCATATGATTTAGATGATGGATATAATTGGCGGAAATATGGACAGAAGCAAGTTAAAGGGAGTGAATTTGCGCGCTCCTTCTACATATGTACACATCACAACTGTAGAGCCCAAAAAAAGCGTGAATTCTCTAATGATGGGCGAATCACTGAGATAATTTACAAGGGATCACATTGTCATCCTAGACCAAGGGGGTCATCTCAAATAGATTCACTTTGA 462 0.4048 MQIQGSSQAQPFASSPLVKSEMAMSSYELILSSLGQIICSGASAPVEADMDGSNPRVVDNNVLQASQVEVRGRGVSVPIERSYDLDDGYNWRKYGQKQVKGSEFARSFYICTHHNCRAQKKREFSNDGRITEIIYKGSHCHPRPRGSSQIDSL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1958 153 FunFam WRKY transcription factor 73 145 - -
Lele04g1958 153 Pfam WRKY DNA -binding domain 86 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1958 153 Gene3D WRKY domain 75 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1958 153 ProSiteProfiles WRKY domain profile. 85 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1958 153 SUPERFAMILY WRKY DNA-binding domain 82 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1958 153 SMART WRKY_cls 85 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1958 153 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 61 147 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1958 Lele-ChrLele04 24135136 24135597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1958 85 148 WRKY Transcription Factor Family AT4G26640 47.692 1.01e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele04g1958 WRKY 1.9e-20 CL0274