Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1929 ATGTTGATGTTTGGTGTAGGTGCTACCTGGGAAGGCATGCAGGCAATCTGTTTGATATTGTTCTTGTATGGAGTGATTGTGTTAGGGAATTCAGACATTGATGCACTGCTTGAACTCAAGAAGAGCATCCGGAATGACCCTTCTGGACTTAATTCTTGGGATTCCAGGTCTTTGGCTTCTGATGGATGTCCTCAGAATTGGTATGGGATATTCTGTGCTGAAGGCAATGTTATATCGATAACTCTGGAAAATGCTGGTTTGGTTGGAGAGTTTAATTTCCTTGCCATTAACGGCCTTAAAATGCTTCGAAACTTGTCACTTTCAAACAACCAGTTCACGGGAAGTGTCTCACGTTTTGGTCCAATGGAATCACTAGAATTTCTTGATCTTTCAGTCAACAAGTTTCATGGGTTGGTACCCTCTGACTTGCTTGAATTACATAATATAGTGTATTTAAATCTTTCATCAAATCAATTTGATGGGACAGTTCCCGTTGGCTTTGACAAACTCAAGCGGTTGAAGTACTTAGATTTGTGCTCTAATGACTTTTCTGGGGATATTATGCATATCTTTTCTCATATGGGTGGCGTGGTTCATGTTGACCTAAGCACCAACAAGTTTTCTGGTTCACTGGATTTGGGACTTGGAAACAGCTCGTTTCTTTCATCGATTCAGTATTTAAATGTTAGCCACAATTCCTTGTCTGGGGATCTGTTTGCTCATGATGGGATGCCATACCTTGACAGTTTAGAGGTTTTTGATGCTAATAATAATCAATTAGTGGGTAATATACCTTCCTTCACATTTGCGGTGTCTCTAAGGATTCTTCGGCTCGGATGCAACCAGTTATCTGGTTCTCTTCCAGAAGGTCTATTGAAGGAGAGTTCAATGGTGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTCAAAGGTCCTGTTGGAAGCATTACTTCTGGAACTCTGAAGAAGCTTAATTTATCTTCAAACAAACTATCAGGCCCCTTACCTTTCAAGGTGGGCCACTGTGCCATAATAGATTTAAGTAACAACATGCTATCGGGTAACTTGTCGAGAATTCAGTATTGGGGTAATTATGTTGAGGTTATTCAGCTCAGTTCAAATTCATTGACAGGAATGCTTCCTAACCAAACTACACAATTTTTGAGGTTGACTGAACTTAAGATATCTAATAATTCATTAGAAGGAAGTCTCCCCTCAGTCTTAGGAACATATCCAGAACTAAAAGAGATTGATCTTAGCCACAACCTACTTTCCGGGACCCTCCTTCCGAGCTTTTTCACCTCGACCAAATTGACCGAGCTTAACCTCTCACACAACATTATTTCTGGATCAGTATCTTTTCAACAAATTCCACATAACCCGCTAGTTTATGCTGAAAATTCTAGTCTAGTGTCTGTTGATCTCTCATACAACAACTTGAGTGGGCATCTACCTACAGAAATAAGTAAACTTCACAATTTGGCAAGTCTCAATCTTTGTAACAACAAATTTGAAGGCGTTATTCCTGATGATCTTCCTGCTCAACTGAGAGAACTCAATGTGTCCTTCAACAATTTTTCTGGCACCGTGCCTGATAAATTAATGAAGTTCCCTGAATCAGCATTTCGCCCTGGAAATTCTTTGCTGATCTTTCCTCATTCGGTCACTTCACCAGAAGATGGCGGTGAACTGGGTTTGAAGAAAAAGGTGCCACATATAAAATCCACAACCAAGATTGCTTTGATCGCGAGTTTGGTTTCTGGTGCTTTTGTTATGGCCCTTCTGAGTGTAATAAGTTTTTATAGGGTTCATTGGCAAAAACAAACAACTACTCATGAAAATGGAGCGAAAGATGTTGCTCATCAGAGTTCTTCTCCATCTGGTTGTGAAGTACCTAATAGAAACATAGAAGCAATATCTGGTTGTGATGATGTCAGAAATGTTCATACTGCTGAAGAGAAGCCGAAAGATTTCGACTTTTCTGAATTAGTTAAGAATGAGGAAGGAATATCATCCCCAATGTCTTTTCTGTCATTTTCAAATCCTTCATCTTCTAGAAGCCACCCATTTGAGAATCCCGTTGCTCTCAAAATATGCTCACCGGATAAATTGTTCGGGGATTTGAATCTATTTGATGGGGCCTTGGAGCTCACTGCAGAAGAGTTTTCTAGTGCTACAGCAGAAATTATCGGTAGAAGTTGTCATGGAACTCTGTATAAAGCTACGCTTAACTCGGGTCACATATTGGCTGTCAAGTCATTAAGGGAAGGATTAGCCAAGAACAAGAAGGATTTTGCAAGGGAAGTTAAAAAACTTGGGACCATCAAGCATCCGAGTTTGGTTTCCCTTCAGGGTTACTACTTGGGTCCAAAGGAGACTGATAAATTCATTATATCCAATTATGTCAATGCACAACCTTTGGACTTTTATCTTCATGATAGAACGAATGTTCATCCAATGTCTCTCGATGAACGATTCAGGGTGGCTACAGCTGTGGCACAATGTCTGAATTACTTACACAATGAGAAAGCCATACCTCATGGCAATCTGAAATCCACGAACATCCTCCTTGAAATTCCTAACCACAATGTGCTGCTCACTGACTACAGCCTGCATCGGATACTAACTACCGCTGGTACTGCCGAGCAAGTTCAAAATGCAGGTTTTCTCGGTTACCGGCCTCCCGAGTTTGCTAGCTCAAGCAAACCATGCCCATCCTTGAAGAGTGATGTATATGCATTTGGTGTGATCTTGTTAGAGCTTCTAACAGGAAGAAGCTCCGGAGACATTGTTACAGGGATCCCTGGGGTCGTCGTCCTTGCAGACTGGGTGCAGTTCTTGGCGGAGCAAAACCGTGGAAGTGAGTGCTTTGACAGGCTGCTCTTGGACAGGCATGGTGGTGGTGGGGTGGAACACCGGCCTCAAGTTCTTGATGAGATGCTCCAGGTGGCTCTTAGATGCATACTTCCGGCATCGGAGAGGCCTGACATGCAAACTGTTTTTGAGGATCTTTCAACATTATTAAGGTAG 3030 0.4168 MLMFGVGATWEGMQAICLILFLYGVIVLGNSDIDALLELKKSIRNDPSGLNSWDSRSLASDGCPQNWYGIFCAEGNVISITLENAGLVGEFNFLAINGLKMLRNLSLSNNQFTGSVSRFGPMESLEFLDLSVNKFHGLVPSDLLELHNIVYLNLSSNQFDGTVPVGFDKLKRLKYLDLCSNDFSGDIMHIFSHMGGVVHVDLSTNKFSGSLDLGLGNSSFLSSIQYLNVSHNSLSGDLFAHDGMPYLDSLEVFDANNNQLVGNIPSFTFAVSLRILRLGCNQLSGSLPEGLLKESSMVLSELDLSQNKLKGPVGSITSGTLKKLNLSSNKLSGPLPFKVGHCAIIDLSNNMLSGNLSRIQYWGNYVEVIQLSSNSLTGMLPNQTTQFLRLTELKISNNSLEGSLPSVLGTYPELKEIDLSHNLLSGTLLPSFFTSTKLTELNLSHNIISGSVSFQQIPHNPLVYAENSSLVSVDLSYNNLSGHLPTEISKLHNLASLNLCNNKFEGVIPDDLPAQLRELNVSFNNFSGTVPDKLMKFPESAFRPGNSLLIFPHSVTSPEDGGELGLKKKVPHIKSTTKIALIASLVSGAFVMALLSVISFYRVHWQKQTTTHENGAKDVAHQSSSPSGCEVPNRNIEAISGCDDVRNVHTAEEKPKDFDFSELVKNEEGISSPMSFLSFSNPSSSRSHPFENPVALKICSPDKLFGDLNLFDGALELTAEEFSSATAEIIGRSCHGTLYKATLNSGHILAVKSLREGLAKNKKDFAREVKKLGTIKHPSLVSLQGYYLGPKETDKFIISNYVNAQPLDFYLHDRTNVHPMSLDERFRVATAVAQCLNYLHNEKAIPHGNLKSTNILLEIPNHNVLLTDYSLHRILTTAGTAEQVQNAGFLGYRPPEFASSSKPCPSLKSDVYAFGVILLELLTGRSSGDIVTGIPGVVVLADWVQFLAEQNRGSECFDRLLLDRHGGGGVEHRPQVLDEMLQVALRCILPASERPDMQTVFEDLSTLLR 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1929 1009 PANTHER OS07G0626500 PROTEIN 19 102 - -
Lele04g1929 1009 Pfam Protein tyrosine and serine/threonine kinase 728 927 IPR001245 GO:0004672|GO:0006468
Lele04g1929 1009 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Lele04g1929 1009 Gene3D Phosphorylase Kinase; domain 1 708 801 - -
Lele04g1929 1009 Gene3D Ribonuclease Inhibitor 29 318 IPR032675 -
Lele04g1929 1009 Gene3D Ribonuclease Inhibitor 319 542 IPR032675 -
Lele04g1929 1009 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 241 - -
Lele04g1929 1009 SUPERFAMILY L domain-like 31 311 - -
Lele04g1929 1009 FunFam Leucine-rich repeat receptor-like protein kinase 709 801 - -
Lele04g1929 1009 SUPERFAMILY Protein kinase-like (PK-like) 727 1004 IPR011009 -
Lele04g1929 1009 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 321 543 - -
Lele04g1929 1009 SUPERFAMILY L domain-like 246 533 - -
Lele04g1929 1009 Pfam Leucine Rich repeat 435 449 IPR001611 GO:0005515
Lele04g1929 1009 Gene3D Transferase(Phosphotransferase) domain 1 804 1009 - -
Lele04g1929 1009 ProSiteProfiles Protein kinase domain profile. 724 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1929 Lele-ChrLele04 23791251 23795598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1929 26 537 Receptor kinase-like Gene Family AT5G07280 32.000 9.18e-40 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele04g1929 PK_Tyr_Ser-Thr 4.2e-27 CL0016