Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1922 ATGAAGGTGAGCAGGTTGGAGAGATTCAAAACTATCAGTAAAGGTGCACGATCAAAATTTTTGAGACAGGTAGAGGCACAAGTTCCTGAACGTGATCAGGTTTATGAGCCCTCTAAAGAAGAACTCAGGAGCTATATTGATCCGTATGATGTTATTTGTTCAGAGTGCTATGAAGGTGGAGATGATGGCCTGATGTTACTGTGTGACCTCTGTGATTCAGCGGCCCACACATATTGTGTTGGTCTGGGGCTGGAAGTGCCCGAAGTTCCTACATTTGGTGTTGTTTACAGCCCAATACTTAATGGGCTTTTCGCTGCCATTCTTGGATGTGCTTGA 336 0.4464 MKVSRLERFKTISKGARSKFLRQVEAQVPERDQVYEPSKEELRSYIDPYDVICSECYEGGDDGLMLLCDLCDSAAHTYCVGLGLEVPEVPTFGVVYSPILNGLFAAILGCA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1922 111 SUPERFAMILY Carbohydrate phosphatase 76 110 - -
Lele04g1922 111 Pfam PHD-finger 52 90 IPR019787 -
Lele04g1922 111 PANTHER F18C1.6 PROTEIN 8 88 - -
Lele04g1922 111 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 93 IPR013083 -
Lele04g1922 111 SUPERFAMILY FYVE/PHD zinc finger 41 85 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1922 Lele-ChrLele04 23648267 23648862 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele04g1922 PHD 1.2e-07 CL0390