Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1919 ATGATTTTTCCACTTCCTGCTTTGGTTTTCCTGGTAGCCCTTTTTTATGAAGATGGGAGACCTGTGGAAGGTAAGGGTGTAGGAAGAAAAGTAATAGATAGGGTACAGGAGACTTATGCGTCTGAGTTAGATGGAAAAGACTTTGCCTATGATGGTGAGAAGAGTTTGTTTACTGTTGGATCTCTTCCTCGAAACAAACTTGAGTTTACAGTTCTTCTAGAGGATGTCATATCAGACAGAAATAATGGAAATTGCAGCCCTGATGATGGTGAAAGGAAGAGGATGCGGCGCCCTAATCGTGCCAAAACATTTAAAGTGGAGATTAGCTTTGCTGCAAAGATTCCGATGCAGGCCATTGCCAATGCATTACGTGGGCAAGAGACTGAGAATTTTCAAGAAGCCATAAGAGTTCTCGATATTATATTGAGGCAAAATGCTGCTAAGAAAGGCTGTCTACTTGTTCGGCAATCCTTCTTCCACAATGATCCGATGAATTTTGCTGATGTAGGCGGTGGTGTTCTCGGCTGCCGAGGATTTCATTCAAGTTTTAGGACTACACAGAGTGGCTTATCCCTCAACATTGATGTGTCAACTACGATGATAATACAACCCGGGCCTGTGGTGGACTTCTTAATTGCCAACCAAAATGTGAGAGATCCTTATTCCCTTGACTGGGCCAAGGCTAAAAGGACTCTGAAGAATTTGAGGATTACAACTAGCCCATCAAATCAAGAGTACAAGATATGTGGGCTCAGTGAACTCCCATGTAGTCAGCAGACGTTTACTCTCAAGAGTAAGGGTGGTGATGATGGTGAAGCAGAGGAAATAACTGTTAAAGAGTATTTTGTAAAATATCGTAACATAGAACTTAAGTACTCTGGTGATTTGCCTTGCATTAATGTTGGGAAGCCAAAACGCCCAACTTATTTCCCCATGGAGCTTTGCTCTTTGGTATCCCTGCAACGTTATACAAAGGCTCTTACTACACTGCAAAGGGCATCATTGGTTGAAAAGTCGCGGCAGAAGCCACAAGAGAGGATGAAGGTTTTGTCAGATGTTTTGAAAGTCAGCAAGTATGATTCTGATCCTATGCTACAAAATTGTTCAGTTCGAATTAATACTGGTTTTACACAAGTTGATGGCCGTGTTCTGCCAGCTCCTAGGTTGAAGTTTGGAAATGGAGATGAATTCAATCCAAGAAATGGGAGGTGGAATTTCAACAATAAGCAATTTGTGCAGCCAGCAAAGATAGAGCGGTGGGCGGTGGCAAACTTTTCTTCACGTTGTGATGTTCGAGCTCTTGTTCGGGATCTGACTAGGATTGCAGGATTGAAAGGAATTCAAGTAGAACCCCCATTTGATGTATTTGAGGAAAGTCCGCAATTTAGGCGTGCCCCACCTATGGTTAGAGTGGATAAGATGTTTGAAGAGATACAGTCGAAACTTCCTGGAGCTCCTCTGTTCCTTCTCTGTCTTCTTCCAGAGCGAAAAAATTGTGATATTTATGGTCCCTGGAAAAAGAAGAATCTTGCTGATTTTGGAATTGTTAATCAGTGCATGTGTCCACAAAGGGTTAATGATCAGTATCTTACCAATGTGTTGTTGAAAATCAATGCTAAGCTAGGTGGTATGAATTCATTTTTATCTGTTGAAAAATCTCCTGCTATTCCCATTGTTTCCAAAACTCCTACCATTATCCTTGGGATGGACGTGTCCCATGGTTCACCTGGGCAGACGGATATTCCTTCCATTGCAGCGGTTGTGAGCTCCAGGCAGTGGCCTTTGATCTCGAAGTATAGGGCGTGTGTTCGAACCCAATCTCCAAAGGTTGAAATGATTGATAATCTGTTCAAGCCAGTAGGTGATAAGGAAGATGAAGGCATTATCAGGGAACTTCTGGTTGATTTCTATACAAGTTCTGGGAATAGAAAGCCTGAAAATATAATCATATTCAGGGATGGAGTTAGTGAATCACAGTTCACACAAGTTTTAAACATCGAGCTTAGTCAGATCATCGAGGCCTGTAAATTTCTTGATGAAAATTGGAACCCCAAATTTGTGGTCATTGTGGCTCAGAAAAACCATCATACCAAATTTTTCCAGAATGGTTCTCCTGATAATGTTCCCCCTGGAACTATCATTGACAGCAAAATTTGTCATCCTCGAAATTATGATTTCTACTTGTGTGCACATGCTGGAATGATCGGAACAACTAGGCCGACACATTACCATGTTCTATTAGACGAGGTTGGTTGCTCTGCAGATGAACTACAAGAACTTGTGCACTCTCTGTCATACGTGTATCAGAGGAGCACCACGGCCATATCTGTCGTCGCTCCGGTCTGTTATGCACACCTTGCAGCAACCCAGCTGGGACAGTTCATGAAATTTGAGGACAAGTCCGAGACTTCATCGAGCCATGGCGGACACTCTTCTGCAGCTGGCGGTGCTGTTCCTCAGTTACCACCACTGCAGGAAAATGTCTGCAACTCAATGTTCTTCTGTTAA 2508 0.4274 MIFPLPALVFLVALFYEDGRPVEGKGVGRKVIDRVQETYASELDGKDFAYDGEKSLFTVGSLPRNKLEFTVLLEDVISDRNNGNCSPDDGERKRMRRPNRAKTFKVEISFAAKIPMQAIANALRGQETENFQEAIRVLDIILRQNAAKKGCLLVRQSFFHNDPMNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPYSLDWAKAKRTLKNLRITTSPSNQEYKICGLSELPCSQQTFTLKSKGGDDGEAEEITVKEYFVKYRNIELKYSGDLPCINVGKPKRPTYFPMELCSLVSLQRYTKALTTLQRASLVEKSRQKPQERMKVLSDVLKVSKYDSDPMLQNCSVRINTGFTQVDGRVLPAPRLKFGNGDEFNPRNGRWNFNNKQFVQPAKIERWAVANFSSRCDVRALVRDLTRIAGLKGIQVEPPFDVFEESPQFRRAPPMVRVDKMFEEIQSKLPGAPLFLLCLLPERKNCDIYGPWKKKNLADFGIVNQCMCPQRVNDQYLTNVLLKINAKLGGMNSFLSVEKSPAIPIVSKTPTIILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVGDKEDEGIIRELLVDFYTSSGNRKPENIIIFRDGVSESQFTQVLNIELSQIIEACKFLDENWNPKFVVIVAQKNHHTKFFQNGSPDNVPPGTIIDSKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGCSADELQELVHSLSYVYQRSTTAISVVAPVCYAHLAATQLGQFMKFEDKSETSSSHGGHSSAAGGAVPQLPPLQENVCNSMFFC 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1919 835 CDD PAZ_argonaute_like 204 318 - -
Lele04g1919 835 FunFam Protein argonaute 3 556 835 - -
Lele04g1919 835 SMART DUF1785_2 152 204 IPR014811 -
Lele04g1919 835 Pfam Piwi domain 489 796 IPR003165 GO:0003676
Lele04g1919 835 Gene3D paz domain 198 323 - -
Lele04g1919 835 Gene3D - 383 549 - -
Lele04g1919 835 Gene3D - 555 835 IPR036397 GO:0003676
Lele04g1919 835 SUPERFAMILY Ribonuclease H-like 472 794 IPR012337 -
Lele04g1919 835 Pfam N-terminal domain of argonaute 23 142 IPR032474 -
Lele04g1919 835 Pfam Argonaute linker 1 domain 154 202 IPR014811 -
Lele04g1919 835 ProSiteProfiles Piwi domain profile. 488 796 IPR003165 GO:0003676
Lele04g1919 835 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 29 798 - -
Lele04g1919 835 Pfam PAZ domain 208 335 IPR003100 GO:0005515
Lele04g1919 835 SMART Piwi_a_2 488 796 IPR003165 GO:0003676
Lele04g1919 835 FunFam Protein argonaute 7 199 323 - -
Lele04g1919 835 Pfam Argonaute linker 2 domain 345 391 IPR032472 -
Lele04g1919 835 Pfam Mid domain of argonaute 398 451 IPR032473 -
Lele04g1919 835 SUPERFAMILY PAZ domain 199 359 IPR036085 GO:0005515
Lele04g1919 835 ProSiteProfiles PAZ domain profile. 229 319 IPR003100 GO:0005515
Lele04g1919 835 CDD Piwi_ago-like 363 790 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1919 Lele-ChrLele04 23605538 23612384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1919 22 835 Eukaryotic Initiation Factors Gene Family AT5G43810 36.353 2.87e-164 501