Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1915 ATGGAAGCTCAGCTACCTATCAACCGTGAAGGAAAGCCTATTCAATGCAAAGCCGCTGTCTGTCGGAATCCCGGCGAGCCGTTAGTGATTGAGGATGTCATCGTAGCGCCGCCTATGTCCGGTGAAGCTCGGATTCGGATCATCTGCACCTCACTCTGTCATAGTGACCTCACGTTCTGGAAGTTGAAGGATCCTCCTGGAATTGTCCCAAGAATTCTGGGCCACGAGGCCGTGGGGGTTGTGGAGAGTGTAGGAGAAGGTGTGAGTGAAGTAAAGAAAGGAGATGTAGTGCTGCCAGTGTTCGTAACACAATGCATGGAGTGTGTTGACTGCAAGTCAAAGAAGAGCAACCTTTGTTCAAATGTGCCATTCAGAATGTCAGGTTGCATGCCTAGACATGAAAGTAGCAGATTCAATGACCTCAAAGGGGAAACCATTCACCATTTCTTGTTTGTGTCAAGCTTCAGCCAATTCACTGTGGTTGATGTTGCCAATTTGACTAAGATTCTTGATCCCTCCTCTGTTCCTCCCAACAAGGCTTGCCTCCTTAGTTGTGGTGTTTCTACTGGAGTAGGTGCTGCTTGGATGACAGCAGAAGTGGAGGCAGGTTCTACGGTTGCCATTTTTGGGTTGGGTTCCATTGGATTAGCTGTTGCAGAGGGAGCTAGACTTTGTGGAGCTGCTAGGATTATTGGGGTGGACCTGAACCCACAAAAATTTGAAACTGGAAAAAAGTTTGGAGTCACAGACTTTGTTAATTCTGGAGAATGTGGGGACAAACCTGTTAGCCAGGTGATTAAAGAGATGACTGATGGAGGAGCTGATTATTGCTTTGAATGCGTTGGAATGGCATCTTTGGTGCATGAAGCCTATGCTTCTTGCCGAAAGGGTTGGGGGAAAACAGTAGTTGTGGGAGTTGACAAGTTGGGATCTCATTTGAGCATTAGCTCTGCTGAAGTTCTTATGAGTGGGAAAAGCCTCATGGGATCTTTCTTTGGAGGCCTCAAACCCAAATCTCATCTCCCTATCCTTCTCCAGCGCTACATTGATAAGGAACTGAAGCTGGATGATTTCGTGACACACGAGATGGAACTTGGTGACATAAATAGAGCTTTTGATTTACTGCAAGCAGGTCAATGTCTTCGATGCGTGATTTGGATGGACGACAAGAAATTATGA 1179 0.4656 MEAQLPINREGKPIQCKAAVCRNPGEPLVIEDVIVAPPMSGEARIRIICTSLCHSDLTFWKLKDPPGIVPRILGHEAVGVVESVGEGVSEVKKGDVVLPVFVTQCMECVDCKSKKSNLCSNVPFRMSGCMPRHESSRFNDLKGETIHHFLFVSSFSQFTVVDVANLTKILDPSSVPPNKACLLSCGVSTGVGAAWMTAEVEAGSTVAIFGLGSIGLAVAEGARLCGAARIIGVDLNPQKFETGKKFGVTDFVNSGECGDKPVSQVIKEMTDGGADYCFECVGMASLVHEAYASCRKGWGKTVVVGVDKLGSHLSISSAEVLMSGKSLMGSFFGGLKPKSHLPILLQRYIDKELKLDDFVTHEMELGDINRAFDLLQAGQCLRCVIWMDDKKL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1915 392 Gene3D - 19 382 - -
Lele04g1915 392 Gene3D - 190 330 - -
Lele04g1915 392 Pfam Alcohol dehydrogenase GroES-like domain 41 123 IPR013154 -
Lele04g1915 392 SUPERFAMILY GroES-like 10 203 IPR011032 -
Lele04g1915 392 FunFam Alcohol dehydrogenase 6 19 202 - -
Lele04g1915 392 Pfam Zinc-binding dehydrogenase 214 334 IPR013149 -
Lele04g1915 392 PANTHER ALCOHOL DEHYDROGENASE 11 385 - -
Lele04g1915 392 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Lele04g1915 392 FunFam S-(hydroxymethyl)glutathione dehydrogenase 190 330 - -
Lele04g1915 392 SUPERFAMILY GroES-like 338 386 IPR011032 -
Lele04g1915 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 350 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1915 Lele-ChrLele04 23529948 23536995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1915 42 188 Monolignol Biosynthesis Gene Families AT4G37970 28.859 9.72e-09 54.3