Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1905 ATGGGCAGTGCATTAATGCTTTTGAAACTGGCATTATTAGCCGCCTACACGCTGGCCGCGGCGCCCACGGAGCTGGTGGCGGATTGCCATAGAAAGTGCGGGAACGTGGACATCCCTTATCCCTTCGGCATGAAGGAAGGCTGCTTCAAAGATCATGATTTTCAAATATTCTGCGACTCTTCCTCTGGGCACCCCATTCCATACCTAGCAAGAGTAAGAAACAACACCCAGGTTCTCTACATCTATGGGAATACTAGTGAGATTCATGTCTCTATGCCTGTTTCTCATGTTTGCTATAATACCACAAGAGACAACAATACGCTATCCTCTTTTGCCTCTGGAAGATTTTGGGTGCCTTCCAAGTTCAGCATATCCAGTGAAAAGAACAAATTCAACGTAGTGGGGCTTGACGCCTTCGGTTACATCTATGACCGGAAAGAAAGAAGAATTCACGGCTGCGAGACGAGTTGCAATGAGCAGAGTTCAGGGACGACGAATTATAGTGGATCCTGCTCCGGCGGCGGCGGCGGCTTCTGCCAGAATGATTTTGAGAAAGCCCTTACAAATTATTCTATTTCTATTTCTCTTTATTTCGATAGCCCAGATGTGCCTGAGGGCCTTCGCCGCTGTGGTTTTGCATTTCTTGCGCAGAACGGATCTTTCAACTTCTCCAACCCCGGCGACCTCAAGAAGCTAAGAGAAAGTAAAAGATCCACGGTGGTTCTCAATTGGGCTGTTGATAATAGGAACTCATGTGGTGGAGCCTGCAAAGGTAACAGTGCAGCATGCAACCAATCAGAAAGTGTCACTGGCTACTACTACTGCAAATGTAAACAAGGGTTCGAAGGCAACCCCTACGACAAAGTCAATGGCTGCAAAGATGTGGATGAGTGCCGCGACATCACCTTAAATAATTGCTTGCATAAGAAGCTTTGCTTAAATATGGATGGCGACTACATATGTTCTTGTCCACATGGACAAAAAGGCAATGGCCGCAATGAGACCACTGGACCAGGATCAGGCTGCAGCTCTCCGGACCATATCATGACAATTCCATTAGTTGTTACTATAGCTTTGTTGGTTGTCTTCACACTGGTCTCCATGTTCTGTTGGGCACGCAAGCAAAGAACTCTGAAACAACTAAGACAGAAAAACTTTGAGCAAAATGGAGGAAACTTCCTTCTACAACAACTCTCACAACAACAAAGATACACTGACAGAACCAGAATATTTACTAAAGTTGAGCTTAAGAATGCCACAAACAACTTCGATGAAACTAGAATTCTTGGTCGTGGAGCACAAGGAACAGTTTACAAGGGCATATTACCAAATAACACAGTTGTCGCCATTAAGAAGTCTAGGGTTGGAGGAGATCCTGAAAATATTAAAAGTTTTATCAATGAAGTGTTTGTGCTTTCACAAGTCAACCATAGACATGTGGTCAAACTTTTGGGATGTTGTCTTGAAACTGAAGTTCCTTTATTAGTTTATGAGTTTGTTGATAATGGAACACTTCTTGACCACCTTGACCCATCCGAAAATGAATGTTCTATCACATGGGAGACTCGTTTAAGAATAGCTACAGAAACTGCTGAGGCCATTTCATATTTACATTCTGCTGCTTCTATTCCGATTATTCATCGAGATATTAAATCTGCAAACATACTGTTAGACCATAATGATAGAGCAAAAGTGTCTGATTTCGGAGCTTCAAGGCTTGTTCATCTTGATGAAGCTCAGGTCGCGACAGTAGTTCAAGGGACGATAGGGTATTTGGATCCGGAGTACCTTCAAACGGGCCAGTTGAATGAGAAGAGCGATGTCTATAGTTTTGGAATAGTGCTCGTGGAGCTACTTACTGGGAATAAAGCTTTTGAATTCAACACATTGGCTAAGCATTTCGTGTCTTCAATGAGAGAAGATCGCTTGTGGGAAATTCTTGATAAGCGAGTGCTGAACCAGAAGAAGAATGAAAAACACTTGAAGGAAGTAGCCTTATTGGCAAGAAGATGCATTAGGCTTAATGGAGAAGAAAGGCCAACGATGAAGGAAGTAGCAATGGAGTTAGAAGGTTTAATGGCAATGGAAAAGCACCTTCAAGAGAAGGACAAGGATTTGATAATGGTAGAAGAAATGGATCTTATATATTTCCAGCACTGCCGGTTTTCTTGGTTTTGA 2178 0.4311 MGSALMLLKLALLAAYTLAAAPTELVADCHRKCGNVDIPYPFGMKEGCFKDHDFQIFCDSSSGHPIPYLARVRNNTQVLYIYGNTSEIHVSMPVSHVCYNTTRDNNTLSSFASGRFWVPSKFSISSEKNKFNVVGLDAFGYIYDRKERRIHGCETSCNEQSSGTTNYSGSCSGGGGGFCQNDFEKALTNYSISISLYFDSPDVPEGLRRCGFAFLAQNGSFNFSNPGDLKKLRESKRSTVVLNWAVDNRNSCGGACKGNSAACNQSESVTGYYYCKCKQGFEGNPYDKVNGCKDVDECRDITLNNCLHKKLCLNMDGDYICSCPHGQKGNGRNETTGPGSGCSSPDHIMTIPLVVTIALLVVFTLVSMFCWARKQRTLKQLRQKNFEQNGGNFLLQQLSQQQRYTDRTRIFTKVELKNATNNFDETRILGRGAQGTVYKGILPNNTVVAIKKSRVGGDPENIKSFINEVFVLSQVNHRHVVKLLGCCLETEVPLLVYEFVDNGTLLDHLDPSENECSITWETRLRIATETAEAISYLHSAASIPIIHRDIKSANILLDHNDRAKVSDFGASRLVHLDEAQVATVVQGTIGYLDPEYLQTGQLNEKSDVYSFGIVLVELLTGNKAFEFNTLAKHFVSSMREDRLWEILDKRVLNQKKNEKHLKEVALLARRCIRLNGEERPTMKEVAMELEGLMAMEKHLQEKDKDLIMVEEMDLIYFQHCRFSWF 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1905 725 Pfam Protein kinase domain 424 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1905 725 Pfam Calcium-binding EGF domain 294 334 IPR001881 GO:0005509
Lele04g1905 725 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 312 323 IPR000152 -
Lele04g1905 725 CDD STKc_IRAK 429 692 - -
Lele04g1905 725 ProSiteProfiles EGF-like domain profile. 294 333 IPR000742 -
Lele04g1905 725 SUPERFAMILY Protein kinase-like (PK-like) 401 689 IPR011009 -
Lele04g1905 725 Gene3D Phosphorylase Kinase; domain 1 394 499 - -
Lele04g1905 725 Gene3D Plasmodium vivax P25 domain 237 339 - -
Lele04g1905 725 ProSiteProfiles Protein kinase domain profile. 423 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1905 725 FunFam Wall-associated receptor kinase 2 393 499 - -
Lele04g1905 725 SMART serkin_6 423 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1905 725 FunFam Wall-associated receptor kinase 2 500 711 - -
Lele04g1905 725 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 696 IPR045274 GO:0007166
Lele04g1905 725 SUPERFAMILY EGF/Laminin 294 332 - -
Lele04g1905 725 SMART egfca_6 294 343 IPR001881 GO:0005509
Lele04g1905 725 Pfam Wall-associated receptor kinase galacturonan-binding 29 90 IPR025287 GO:0030247
Lele04g1905 725 SMART egf_5 251 293 IPR000742 -
Lele04g1905 725 SMART egf_5 297 343 IPR000742 -
Lele04g1905 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Lele04g1905 725 Gene3D Transferase(Phosphotransferase) domain 1 500 715 - -
Lele04g1905 725 ProSitePatterns Calcium-binding EGF-like domain signature. 294 321 IPR018097 GO:0005509
Lele04g1905 725 FunFam Fibrillin 2 289 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1905 Lele-ChrLele04 23445266 23454227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1905 4 712 Receptor kinase-like Gene Family AT1G21230 42.740 5.86e-175 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele04g1905 Pkinase 1.3e-51 CL0016