Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1890 ATGAGGAAAAAACTCGATACTCGTTTCCCTGCCGCTCGAATTAAGAAAATTATGCAATCGGATGAGGATGTAGGGAAGATTTCCATGGCCGTGCCTCTTCTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAGATTTATGTGATCGGACATATGACATAACATTGAGAAGAGGGGCAAAGACAATGAATTCTTATCATTTAAAACAATGTGTACAGAGTTTTAATGTCTTCGATTTTCTGAAAGATATTGTCCGCAAGGTTCCTGATTTAGGTGGCCACGCTGCTTCTGCAGATGACCGTACTGTCTGCAAGAGAAGGAAAGTCCATGACGATGGAAATGACAGTGAGGATGATGCAAAAAGAAATAAGATGCCAGAAAATGCACATCATGCTGGTGGTAGGGGAAGAGGTCGTGGCAGAGGCAGGGGTCGTGGCCGAGGAAGTAGAACAACAGATCGTGAGAATAATGCACATGTCAAGTCTGAAGATGATCATCATCATCATACAGATGCGTCGAAGCACCATGACATGCGCAGTCACAGCAATGAAAGCATGGAAACTTGTACAGAACATGAAGTGAAGCCTTCCATTAGCAAGACATCAGAAGCATGCTTTAGAAATTTCGACTTAAATATGGATCCCATGAAGGAGGACGGCGATTCGCCACCCAGCATAGCTGCTGTCCCACCTTGTCCATCCAAAAAGCCAACCGCAACTCGTCCACCGGAAAAACCCACCACAACTTGTCCATCTGAAAAACCAACCACCACAGAATTGAGACACGAAGAAATCCCGGGGTGGTCGCTATCCGACGTGGAAAAAATGGCCATTGATCCTATTCAACTAGTCAACATGAATGGAAGGATGGATGAAGAAGATGAAGATTATGATGAAGAAAGTTGA 903 0.4408 MRKKLDTRFPAARIKKIMQSDEDVGKISMAVPLLVSKALELFLQDLCDRTYDITLRRGAKTMNSYHLKQCVQSFNVFDFLKDIVRKVPDLGGHAASADDRTVCKRRKVHDDGNDSEDDAKRNKMPENAHHAGGRGRGRGRGRGRGRGSRTTDRENNAHVKSEDDHHHHTDASKHHDMRSHSNESMETCTEHEVKPSISKTSEACFRNFDLNMDPMKEDGDSPPSIAAVPPCPSKKPTATRPPEKPTTTCPSEKPTTTELRHEEIPGWSLSDVEKMAIDPIQLVNMNGRMDEEDEDYDEES 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1890 300 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Lele04g1890 300 FunFam dr1-associated corepressor homolog 1 86 - -
Lele04g1890 300 MobiDBLite consensus disorder prediction 145 197 - -
Lele04g1890 300 MobiDBLite consensus disorder prediction 225 239 - -
Lele04g1890 300 MobiDBLite consensus disorder prediction 104 133 - -
Lele04g1890 300 MobiDBLite consensus disorder prediction 104 197 - -
Lele04g1890 300 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 127 - -
Lele04g1890 300 MobiDBLite consensus disorder prediction 216 274 - -
Lele04g1890 300 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Lele04g1890 300 MobiDBLite consensus disorder prediction 240 254 - -
Lele04g1890 300 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1890 Lele-ChrLele04 23254984 23257477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1890 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 66.165 2.14e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele04g1890 CBFD_NFYB_HMF 1.5e-18 CL0012