Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1875 ATGGGTTGGAGATGGTGCTGTGTGATCCTGGTTCTGCAACTGTTTATTCCTCCGTTCACGGCTTCTTCTTCACGTTCAATTATAAGGAATTTACCTGGCTTCTCCGGTGACCTCCCATTCAAGCTTGAAACTGGATACATAGGAGTGGGAGAAGAAGATGAAGTGCAATTATTTTACTTATTTGTGAAATCTCAAAGAAATCCCTCCACAGATCCAATCTTACTTTGGTTTGTTGGAGGCCCTGGTTGCTCTGCCCTCTCTGCATTTCTTTTTGAAAATGGACCAGTGACAATAGACCGCAATTCCAGAGGGATTCTTCCAACACTTGTATTAAACCCATATTCTTGGAATCAGGTACTCAACGTCATGTACATAGATTTACCAGTTGGCACAGGATTTTCTTACTCAAAAACACAACAAGGTTACCATAGCAGTGATACACTATGGATAGAGAATACATATGATTTTCTACAAAAGTGGTTTATTGATCATCCTGAGTTTGGCTCAAATTCATTTTACATTGGTGGTGGTTCATATTCGACTATGCCTACCGTTCCTCTTGTTAAAAAAATATATGAAGGTTACCGAGCAGGAAGCAATCCACTCATAAATATCAAAGGTTTTGTGCTTGCCAGCCCATTTACCGATAAGTTCCTGGATTCAAACTCCAAAGTTGAATATGCACACCAGCTAAGTCTTATATCAGATGAGCTATATGAGTCAATCAAGGCAAGTTGTAATGGTGATTATGTCAACATAAATCCAAACAACACAAAGTGTGTCTCAGATCATGAAGCCTACTCTCGTCTGATTCGTTACATAAACATAAATCAAATTTTGGAACCTTTTTGCATTACTACCCCCAATGGCAATGAAAGAATTCTCTTGGAAGATTCATCATCAGAAGGGATCCTCCAGTCATTGCACAATGTTTCCGCATTCTGGTGTCGTGGTTATGATCACATACTTGTGAACCAATGGGCAAATAATGAGGATGTTAGGAAGGCTCTTCAGGTTAGAGAGGGAACTAAAGGGGAATTCTTGAGATGCAACAAGAGTTTATCATACAAAAGAGATCTACAAAGTGTTGTTGATTATCATCGCATTCTCACTAAGACTAACCTTCAATGTCTTGTCTACTGTGGTGATCTTGACTTGGCGATACCACATGTTGGTACAAAAGCTTGGATAAGGTCTTTGAACTTGAAAATAGAGGATCCTTGGCGTGCATGGTTTGTTGATGGTCAAGTTGCTGGATACACACAGATTTACAAGAACCATGACTACTTCTTGACATATGTTGCTGTGAAAGGTTCTGGTCATGTAGCCCAATCGTATAAGCCTAAAGAAGTTCTCCAAATGATAGATAGGTGGTTGTCATATTCTATTATTTGA 1395 0.3935 MGWRWCCVILVLQLFIPPFTASSSRSIIRNLPGFSGDLPFKLETGYIGVGEEDEVQLFYLFVKSQRNPSTDPILLWFVGGPGCSALSAFLFENGPVTIDRNSRGILPTLVLNPYSWNQVLNVMYIDLPVGTGFSYSKTQQGYHSSDTLWIENTYDFLQKWFIDHPEFGSNSFYIGGGSYSTMPTVPLVKKIYEGYRAGSNPLINIKGFVLASPFTDKFLDSNSKVEYAHQLSLISDELYESIKASCNGDYVNINPNNTKCVSDHEAYSRLIRYININQILEPFCITTPNGNERILLEDSSSEGILQSLHNVSAFWCRGYDHILVNQWANNEDVRKALQVREGTKGEFLRCNKSLSYKRDLQSVVDYHRILTKTNLQCLVYCGDLDLAIPHVGTKAWIRSLNLKIEDPWRAWFVDGQVAGYTQIYKNHDYFLTYVAVKGSGHVAQSYKPKEVLQMIDRWLSYSII 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1875 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 448 IPR001563 GO:0004185|GO:0006508
Lele04g1875 464 FunFam Carboxypeptidase 315 463 - -
Lele04g1875 464 SUPERFAMILY alpha/beta-Hydrolases 28 460 IPR029058 -
Lele04g1875 464 Gene3D alpha/beta hydrolase 21 295 IPR029058 -
Lele04g1875 464 Gene3D - 316 462 - -
Lele04g1875 464 FunFam Serine carboxypeptidase-like 19 21 289 - -
Lele04g1875 464 Pfam Serine carboxypeptidase 32 460 IPR001563 GO:0004185|GO:0006508
Lele04g1875 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Lele04g1875 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Lele04g1875 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Lele04g1875 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1875 Lele-ChrLele04 23139110 23146109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1875 323 460 Calmodulin-binding Proteins AT2G22960 44.203 1.57e-37 134