Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1864 ATGAAGATTCTGCCTCGGTATGCGTTGGTTTCCTTCATCATTATTAGTCACTCAGCACAGGTTGTTGCAGATGATGGCAATTCAGGTAAACACTTTCCTAGCCTTCAAAATCTTCTTTTGGTACCATTGTACAAGGACGATTTGTATGACCGTTTGTGGCGCATATATGATACTCGTTGGGATATCTTAGAAACAAGTGAACAAGTAAAACTAGAAAACTCCACTTATGAACTGCCATCAGAGATATTACTCACAGCATTTAATGCCATGATGGAGATCAAGAGTACTTATGGGGTATCCAAAATCAGTTGGCAAGGGGACCCATGCGTGCCTTCTAATTTTGTATGGGAAGGTGTTAGATGCAACTCTGGAAACAATACAAGAATCGTTTCATTGAACTTGAACTCAAGCAAACTCACAGGACAAATAGCTCAAACTTTCACCCGTTTGGAAAAATTGGAGTCCTTAGATTTGTCAAACAACGAATTGACAGGAGAACTACCAGAATTTCTCGCAACTCTTCCTAATTTGAGATTCCTTGATGTGACTGGAAACAAACTCACAGGTTCAATACCCAAGGCTTTGAGGGAAAATGCTAATTTGCAGCTCAGTTTCGCCAACAATCCAGATCTCTGCGAGTCAGATTCATGTGACAAAGAACGCAAGTTTGTAATTCCTCTTGTTACATCAGTTGCAGTTCTTGTCCTAATTGCCATTCTTTCTATGATTATTTGGAGACTGAGAAAGAAAAGACAAGATGTGGATTTGTCTACCAAATCCCTCAAGATGGAAGTTCCAAAACAAAAGGGTCGAGAATTTTCTTACTCACAAGTCCTTCGTATCACCGAGAATTTCAAAGCTCTTATTGGAGAAGGAGGATTCGGTAAAGTTTACCTTGGTACTTTAGAAGATGATTCTCAAGTTGCAGTAAAATTACTTTCACCAACATCAAAACAAGGATACAAGGAATTTCAATCAGAGGCTCAACTGTTGACAGTTATTCATCATAGAAACTTGGTTTCACTCATTGGGTATTGCCATGAGAACAACATCATGGCATTGATTTATGAATATATGGATAATGGGGACCTTGGCCTACTATTATCAGAGAAAAACTCCAATGTATTGAAGTGGAATGAGAGACTTCAAGTGGCAATCGACACTGCAAAAGGATTGGAATATCTTCATACTGGTTGCAGTACTCCTATAATCCATAGAGACTTGAAGCCATCCAACATTCTATTAAATAAATCCATGATAGCCAAGATTGCTGATTTCGGACTCTCTAGAGTATTTACAGATGAAAGAAATTCTCATCTATCAACTCAACCAGCTGGTACTCCTGGTTACATTGATCCTGAAGGATCTGAGGATATCAGTTTCATTCTTGATTGGATTCATCCTAAAATTGAATGTGTGGATATTGAAGCCATTGTCGATCCAAGATTAGCTTCAGGATTCCATGTTAGTTCAACATGGAGGGCTATTGAAGTAGCACTTTCATGTGTCCTACCAACACCTTCCCAAAGGCCAAACATAAGTTACATATTGCAAGAACTACAAGAATGTTTAGCTTTGGAGATGGATCAAGCTAGAATAGATAATATGACAAGTAGTTCACATGATACTAATGTGAACAGTGAATTAATCACTCTTGTCTATGCTAGGTAG 1671 0.3848 MKILPRYALVSFIIISHSAQVVADDGNSGKHFPSLQNLLLVPLYKDDLYDRLWRIYDTRWDILETSEQVKLENSTYELPSEILLTAFNAMMEIKSTYGVSKISWQGDPCVPSNFVWEGVRCNSGNNTRIVSLNLNSSKLTGQIAQTFTRLEKLESLDLSNNELTGELPEFLATLPNLRFLDVTGNKLTGSIPKALRENANLQLSFANNPDLCESDSCDKERKFVIPLVTSVAVLVLIAILSMIIWRLRKKRQDVDLSTKSLKMEVPKQKGREFSYSQVLRITENFKALIGEGGFGKVYLGTLEDDSQVAVKLLSPTSKQGYKEFQSEAQLLTVIHHRNLVSLIGYCHENNIMALIYEYMDNGDLGLLLSEKNSNVLKWNERLQVAIDTAKGLEYLHTGCSTPIIHRDLKPSNILLNKSMIAKIADFGLSRVFTDERNSHLSTQPAGTPGYIDPEGSEDISFILDWIHPKIECVDIEAIVDPRLASGFHVSSTWRAIEVALSCVLPTPSQRPNISYILQELQECLALEMDQARIDNMTSSSHDTNVNSELITLVYAR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1864 556 Pfam Leucine rich repeat 129 187 IPR001611 GO:0005515
Lele04g1864 556 ProSiteProfiles Leucine-rich repeat profile. 152 175 IPR001611 GO:0005515
Lele04g1864 556 SMART serkin_6 283 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1864 556 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
Lele04g1864 556 FunFam Leucine-rich repeat receptor-like protein kinase 261 358 - -
Lele04g1864 556 FunFam Leucine-rich repeat receptor-like kinase 85 214 - -
Lele04g1864 556 SUPERFAMILY L domain-like 110 202 - -
Lele04g1864 556 Gene3D Transferase(Phosphotransferase) domain 1 458 539 - -
Lele04g1864 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Lele04g1864 556 SUPERFAMILY Protein kinase-like (PK-like) 265 520 IPR011009 -
Lele04g1864 556 PRINTS Leucine-rich repeat signature 174 187 - -
Lele04g1864 556 PRINTS Leucine-rich repeat signature 153 166 - -
Lele04g1864 556 Pfam Protein tyrosine and serine/threonine kinase 285 454 IPR001245 GO:0004672|GO:0006468
Lele04g1864 556 Gene3D Ribonuclease Inhibitor 82 215 IPR032675 -
Lele04g1864 556 Gene3D Phosphorylase Kinase; domain 1 255 358 - -
Lele04g1864 556 ProSiteProfiles Protein kinase domain profile. 283 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1864 556 FunFam Os07g0541700 protein 344 447 - -
Lele04g1864 556 Gene3D Transferase(Phosphotransferase) domain 1 359 457 - -
Lele04g1864 556 PANTHER OS07G0107800 PROTEIN-RELATED 87 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1864 Lele-ChrLele04 23025575 23032647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1864 77 550 Receptor kinase-like Gene Family AT2G28970 42.155 2.40e-132 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele04g1864 PK_Tyr_Ser-Thr 2.7e-38 CL0016