Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1857 ATGATGGCGTCTCCAGCTCTCGGTGCTCTGAGGCTATCTCTGATTCCCGCTCGCTCTATCTCTTCTCCTTCCAATCTTCGCGCCTTCTTCATTTGTTCTCTATCTCCCAGGGTTTCCTCTCATAGATTTAAAGCTTGTTCACAACCTCTTACCCAGTGCAGCAGCAGCAGCAGTGCTGAATCTGAAGGTGCTAGGGAGATCCTGGTGCAACACTTGCTTGTTAAAGAAGATGATCAGAAGCTACTATTGGATCTTCAGCAGAGAATCTCATCAGGTGAAGACTTGAGTGATCTTGCCGTAGAATACTCAATATGCCCATCCAAAGAAGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGGCAAATGGTTCCTGAATTTGAGGAAGCTGGGTTTAATGCACCTTTAAACAAAGTTGTGAGGTGTAAAACAAAATTTGGATGGCACCTTCTTCAAGTTTTATCTGAAAGGGAAGAATCTATTCTTCAAGACATTCAACCTGATCAGCTTCATGTGAAAATTCACAATCCCAAGTTTATGGAGGAGGCACAATTGATTGATGTTCGAGAGCCTGAGGAAGTGGAGAAAGCATCTCTGCCAGGTTTTAAGGTTCTTCCCCTCCGACAATTTGGAAATTGGGGACCTAATATCACTAGCACATTTGATCCTAACAAAGATACATATGTTTTGGGATTTAGAAGAGTATACAATGTATCTGGGGGAATCCATGCGTATGCTGTGAAGGTTGATCCATCAGTCCCTACTTACTAG 768 0.4362 MMASPALGALRLSLIPARSISSPSNLRAFFICSLSPRVSSHRFKACSQPLTQCSSSSSAESEGAREILVQHLLVKEDDQKLLLDLQQRISSGEDLSDLAVEYSICPSKEEGGMLGWVRKGQMVPEFEEAGFNAPLNKVVRCKTKFGWHLLQVLSEREESILQDIQPDQLHVKIHNPKFMEEAQLIDVREPEEVEKASLPGFKVLPLRQFGNWGPNITSTFDPNKDTYVLGFRRVYNVSGGIHAYAVKVDPSVPTY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1857 255 Pfam PPIC-type PPIASE domain 67 154 - -
Lele04g1857 255 Gene3D - 61 157 IPR046357 GO:0003755
Lele04g1857 255 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 161 253 IPR036873 -
Lele04g1857 255 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 64 154 IPR000297 GO:0003755
Lele04g1857 255 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 22 255 - -
Lele04g1857 255 ProSiteProfiles Rhodanese domain profile. 178 253 IPR001763 -
Lele04g1857 255 Gene3D - 158 229 IPR036873 -
Lele04g1857 255 SUPERFAMILY FKBP-like 66 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1857 Lele-ChrLele04 22983534 22986567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1857 10 255 Sulfurtransferasese or Rhodanese AT5G19370 54.839 6.51e-96 281