Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1844 ATGGATCTTCTAAGCATCACCAATCCCTCACTCTTCACCGGGGATTTCTTCTCAGGAGCCGGCGAGCTCGCCACCAACAACAACCATATTCTCCGGCCACCAAAAAGGCCCGTGGGAAGACCTAAGGGTTCAAAGAACAAGTCCAAGGCCGTCGTGGAAATCCCCGCCGACGAACCCTCTGACAACAACCATATTCTCCAGCGAGTAAAAAGACCCGTCGGAAGACCCAAGGGTTCAAAGAACAAGGCCAAGACAGTACCACAGCCCATCGAGACCATATCTTTAAATCCGGAGATCGTCATTGAAATCCCCGCCGGCGCCAAAGTGGTACACTCGCTCCTCCAGTTCTGTCACTGCCACAACCTCTCCGTCACCGTGTTAAATGCCTCCGGTCTACTTGCTGACATCGTCCCCCTCAACGAACCAAACGTCTCCATCCCCGGACCTTACACGATACTGTCTCTTTCTTGTACCGTCGTGCCAACCCCACCACCACCTTCTGGTGCCATAAACTCGCCGGAGATTAGTTTTCCGTTGGTGGTTGTTCTTTCTTTGCTGAACGATGTTGCATTGGGAGGAATAGTAGCAAGAAGTGTGACAGCGGCGAGCGTGGTGAAGGTCGTGGCGATGACGACGGTGCTTAACAATGTGACGTTTGAGACTACCAACAGAGACGTAGAAAATACACCGGTCAGCAATTTACAGCCCCAGAGTCTTCAGTTCAGTGAGTTTCTTCAATCTCTTATTTCCGGCGATCTCATGAAGAATCCAATACAAGAGAAAGAAAAAGATCAAGAACAAGAACAGGATCAGATGATCAAGAAGACGAATAATAATGATGAGTCGATGATCAATGGAGATATTTGGCGATATGAGGAAAATCTGACGCCTGGCCCATATTTCACTTCATCCTAA 915 0.4918 MDLLSITNPSLFTGDFFSGAGELATNNNHILRPPKRPVGRPKGSKNKSKAVVEIPADEPSDNNHILQRVKRPVGRPKGSKNKAKTVPQPIETISLNPEIVIEIPAGAKVVHSLLQFCHCHNLSVTVLNASGLLADIVPLNEPNVSIPGPYTILSLSCTVVPTPPPPSGAINSPEISFPLVVVLSLLNDVALGGIVARSVTAASVVKVVAMTTVLNNVTFETTNRDVENTPVSNLQPQSLQFSEFLQSLISGDLMKNPIQEKEKDQEQEQDQMIKKTNNNDESMINGDIWRYEENLTPGPYFTSS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1844 304 Gene3D - 98 235 - -
Lele04g1844 304 MobiDBLite consensus disorder prediction 25 84 - -
Lele04g1844 304 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 211 IPR005175 -
Lele04g1844 304 ProSiteProfiles PPC domain profile profile. 91 237 IPR005175 -
Lele04g1844 304 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 68 262 IPR014476 GO:0003680
Lele04g1844 304 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 221 - -
Lele04g1844 304 MobiDBLite consensus disorder prediction 260 275 - -
Lele04g1844 304 MobiDBLite consensus disorder prediction 260 285 - -
Lele04g1844 304 Coils Coil 258 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1844 Lele-ChrLele04 22867147 22868061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1844 59 242 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 29.469 9.06e-16 74.3