Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1841 ATGAGAGGCATCATTGAGACATTGTGTGAGAGAGATATTCATATATCTTCAATTGTGGCTACCGCAAGGAGGTTGCCTTCTGATTCTGGCGCTTTTGCTGATTGGCCGGCTTCTTCCGCCGGCCGTGCTGCCCCTGCCGATGAGCTCTCCCTCGGCTTCAATGCTGGACCTGCCCCCGGGGGATCTGCTGCTGGTCCTACCTCAGGAATGTGGTCTGGTGGTGCTGCCTCCGCCGCGAGGTCGATCAATTATGGTTACTCGCAGGAGATGGGAGGCATGCTCGGCCTCCGGGATCTCTACGTGGTGGCGCCGGCGTCTTCGTTTCACCATCACCACCACCACCACCACCAGTCCGCCGTCATGACCGATCCTCATTCGGTGAACAGCTCACACCCCGCAACTGCGCTCGGCGTCGGCGTTATTCCTCTACTCGCCGCCACGCCGTGTCTTGGCCCGTCGGCAAACATCGCCGAGAACAACGAGACAACATTGATGAGTAATCGAAGCCGAGGTGGGGCAATTCAGCTGTGGCAAGACCAGGAGTCTGAGCATGGTCATTATTTGAAGAAACAAGGTATAACGATGTTTGAACTCAACGACAGTTCTGGGAATCTGGTTCAGAACGAGAATGGATTAACCGTCTCCGCCGCGAACAGCGGCGGCGGAGCAACGTGTCAGGACTGTGGGAACCAAGCGAAGAAGGATTGTAGTTACAGAAGGTGTAGAACTTGCTGCAAGAGTCGGAATTACGACTGCCCTACTCACGTGAAGAGCACGTGGGTGCCGGAGTCTCGGAGGAGAGAACGCCGTCTGATGGCCGCAGCTGCGGCGGCGATTACTACCGGTGGATCCACCGGTGCTACTTCTGGTGTCAAGAAACCTAGACTCGTCACATCTCAACAACAGACCACAACAAACTCTCACACTTCCACATCTAATACCACTCCTCCTAGAAGCTTCGACACTGGTTCTAGCCACCAAGATGCTGGTTTTAAGGAATCACTACCTGGTCAAGTTCGAGCTCCGGCGGTGTTCAAGTGTGTTCGGGTGACGGCGGTGGACGAAGCTGGGCAGTATGAGTTTGCTTATCAGGCTACTGTCAAGATTTGTGGCCATGTTTTCAAAGGGTTTCTGTATGATCAAGGGGTTGAGAGTAGAGATGTGTATCCCAATTTGTCGGAGCTTCATCTCGGTGGCAGTTCCGCCGCTGCCGCCGGGAATGGGAGGAATGGGGCTTCATCTTCATCCCCAATGATTGATCCATCTGATGTATATGCAGCTTCAGGTGGTGGAGGAGGCTTACTTGGAGGAGGATCAACTTATGGTAATCCAATAAATTAA 1341 0.5384 MRGIIETLCERDIHISSIVATARRLPSDSGAFADWPASSAGRAAPADELSLGFNAGPAPGGSAAGPTSGMWSGGAASAARSINYGYSQEMGGMLGLRDLYVVAPASSFHHHHHHHHQSAVMTDPHSVNSSHPATALGVGVIPLLAATPCLGPSANIAENNETTLMSNRSRGGAIQLWQDQESEHGHYLKKQGITMFELNDSSGNLVQNENGLTVSAANSGGGATCQDCGNQAKKDCSYRRCRTCCKSRNYDCPTHVKSTWVPESRRRERRLMAAAAAAITTGGSTGATSGVKKPRLVTSQQQTTTNSHTSTSNTTPPRSFDTGSSHQDAGFKESLPGQVRAPAVFKCVRVTAVDEAGQYEFAYQATVKICGHVFKGFLYDQGVESRDVYPNLSELHLGGSSAAAAGNGRNGASSSSPMIDPSDVYAASGGGGGLLGGGSTYGNPIN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1841 446 MobiDBLite consensus disorder prediction 282 331 - -
Lele04g1841 446 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 224 266 IPR006510 -
Lele04g1841 446 MobiDBLite consensus disorder prediction 282 334 - -
Lele04g1841 446 Pfam Domain of unknown function (DUF702) 222 384 - -
Lele04g1841 446 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 335 383 IPR006511 -
Lele04g1841 446 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 107 428 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1841 Lele-ChrLele04 22840756 22843280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1841 19 424 C2H2 Transcription Factor Family AT5G12330 47.518 1.00e-92 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele04g1841 DUF702 4.4e-57 No_clan