Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1840 ATGGAAGAATCAGGCAAATTGCCATCAGAAGAGAATAAAGGCTCTATGGAGAACAATAAGAAGAGAAAACTCAAAACACCTGCTCAGGTTTATGCTCTGGAGAAATTTTATAACGAGCACAAATATCCCACTGAGGAAATGAAATCAGAACTTGCTGAGGAGTTGGGGTTGACAGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGTTAAAAGATAAAAGGTTGTTGAAAGATGAAGCTTGTGCTAATGGGCGACGAGATATTTCAAGCGGTGTCATCCAAGATCATGGAAGTGGACTAGGGCAAGATTCATGCGGAAGCACCAAACATGGTGATTATAGGCATCTTGATCCCAAAGAGGTCGAGAGTCGTGGCCTTTATGGTGGTCGTGATCTTTTAGTTTCAGATATGGCCTATGCACGTAGGAAACATTATTCAGAAAATGTTTGTGCAATGGAAGACACATCATCTGAGAGAAGCTCATCTTTGCAAGATCAGGATTCATATGATGCTGAGCCTTCTGGGTATCGCACACCTGATGGAGCTCTGCCAACTAAAATTCCCAAGGCTGCCACAAACGTGAGATATAAACCATCAGGCTATCTTAAAGTAAAAGGAGAGATAGAAAACCCTGTTATAACTGCTGTTAAGAAGCAATTAGGAAGAAATTATCGGGAAGATGGTCCGCTACTTGGTATAGAATTTGATCCACTTCCTCCAGGAGCATTCGAGTGTAAAATTGCAGATCCATTTCATGAAACATACTATATGGCAAATCATGCTCCCTACTCTCCTGAAGTTGCTGCTGTGAAAAGGCAACCCAGTCTTTGTGCTAGATATGATTCGTATGATACCAAATTCAATTCCCAAGATTCACATATGGAAGAAGACCTCTCTGATTTCCAGGATAAGAAATCTCACCAGCATTCAAAGCAAAGACCACCTTTGTACAGTCATACCTTTCGATTTCCTACCAGACACTCTTCTCTGGATCTGTACAAACATTCTGTTGGAGAAGCACCTGCATATAATAGCAAAGAGAATCGTAGAGTTGGCATCAAGCATGAGGGCTTTGAAGGGTTGAAATCTGATGCTGCTTCTAATCATAGTGATCATTATGATGGTAACCTTGCAGCAAACCCAAAAGATGCACTGTTGCATGGATATGATAATCTCAATTCGAAGAATGTTCAGAGTGAATATAAACTTAAGCCTTCAAACTCGATCAGGAATCCTTTTGTTTCTATGGATACTAAGGATAGAGGAGGCCTATCCAGTAGGATGATAAAGGAAAAGAAGTCTGGTGAAAAAAGAAAGGCAAGAAAGCAATGCGATGATCCAGATGGACTAAGGATGCTTTCACATGAGGCTGCAAAACGTCTTGTTGATCCTCCTCTACAATATAATGTTATAGAAGAACATGTCGCGGAGATGCAGCCACATAAAGGCCAGAGATCTTCCATGGAAGTGTCATCAAGCTTTAGTGAGGATGAAACTGCGAATCCCAGCTCATCTCTCGATGAAGCCATCGGTGGCCAGTGA 1545 0.4142 MEESGKLPSEENKGSMENNKKRKLKTPAQVYALEKFYNEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDEACANGRRDISSGVIQDHGSGLGQDSCGSTKHGDYRHLDPKEVESRGLYGGRDLLVSDMAYARRKHYSENVCAMEDTSSERSSSLQDQDSYDAEPSGYRTPDGALPTKIPKAATNVRYKPSGYLKVKGEIENPVITAVKKQLGRNYREDGPLLGIEFDPLPPGAFECKIADPFHETYYMANHAPYSPEVAAVKRQPSLCARYDSYDTKFNSQDSHMEEDLSDFQDKKSHQHSKQRPPLYSHTFRFPTRHSSLDLYKHSVGEAPAYNSKENRRVGIKHEGFEGLKSDAASNHSDHYDGNLAANPKDALLHGYDNLNSKNVQSEYKLKPSNSIRNPFVSMDTKDRGGLSSRMIKEKKSGEKRKARKQCDDPDGLRMLSHEAAKRLVDPPLQYNVIEEHVAEMQPHKGQRSSMEVSSSFSEDETANPSSSLDEAIGGQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1840 514 MobiDBLite consensus disorder prediction 93 112 - -
Lele04g1840 514 MobiDBLite consensus disorder prediction 409 459 - -
Lele04g1840 514 MobiDBLite consensus disorder prediction 424 459 - -
Lele04g1840 514 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 508 - -
Lele04g1840 514 MobiDBLite consensus disorder prediction 292 321 - -
Lele04g1840 514 MobiDBLite consensus disorder prediction 292 311 - -
Lele04g1840 514 MobiDBLite consensus disorder prediction 473 514 - -
Lele04g1840 514 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Lele04g1840 514 Gene3D - 9 89 - -
Lele04g1840 514 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Lele04g1840 514 MobiDBLite consensus disorder prediction 152 187 - -
Lele04g1840 514 SMART HOX_1 18 80 IPR001356 GO:0003677
Lele04g1840 514 CDD homeodomain 20 75 IPR001356 GO:0003677
Lele04g1840 514 SUPERFAMILY Homeodomain-like 18 85 IPR009057 -
Lele04g1840 514 MobiDBLite consensus disorder prediction 152 172 - -
Lele04g1840 514 MobiDBLite consensus disorder prediction 485 514 - -
Lele04g1840 514 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1840 Lele-ChrLele04 22804667 22808966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1840 3 508 Homeobox Transcription Factor Family AT4G03250 38.577 3.72e-82 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele04g1840 Homeodomain 1.2e-17 CL0123