Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1831 ATGCATCATGGTTGTTCAGTTCCTATTGTTCATCGTGACGTATCGAGCAAGAATGTCCTTCTAACATCAGAATATGAAGAAGCTCACATCATTGACTTTGGAACCGCGAAGTTTTTAAATCCTGACTCAAACAATATGACCACATTTGCTGGCACATTTGGATATGCTGCTCCAGAGATTGCTTACATTATGGAAGCGAATGAGAAATGTGATGTCTATAGCTTTGGAGTGTTGTCTTTGGAGATCATTATGGGAATACATCCAGGAGAGCTTATTTTATCTTTGATAGATAAATCATCAACCACATTTGATTTGCTGTTAAAGGATGTGTTGGACCCACGACTTTCACTACGCAGAAAATCAATTCTTGATGAGGTTATTGCAGTTGTAAAAATAGCATTTTCTTGTTTGAATGAGAATCCTGGATCTCGTCCAACCATGGAACAAGTATCTAAGGACCTTGCACGACAACCAAAGTCTCATATGGAAGATCCCTTTGTCACTATCACACTTGGACAGCTAATGAAGGATTAA 534 0.3858 MHHGCSVPIVHRDVSSKNVLLTSEYEEAHIIDFGTAKFLNPDSNNMTTFAGTFGYAAPEIAYIMEANEKCDVYSFGVLSLEIIMGIHPGELILSLIDKSSTTFDLLLKDVLDPRLSLRRKSILDEVIAVVKIAFSCLNENPGSRPTMEQVSKDLARQPKSHMEDPFVTITLGQLMKD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1831 177 Gene3D Transferase(Phosphotransferase) domain 1 1 168 - -
Lele04g1831 177 Pfam Protein kinase domain 8 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1831 177 SUPERFAMILY Protein kinase-like (PK-like) 1 154 IPR011009 -
Lele04g1831 177 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele04g1831 177 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1831 177 PANTHER LEUCINE RICH REPEAT KINASE 2 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1831 Lele-ChrLele04 22721423 22722469 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1831 1 159 Receptor kinase-like Gene Family AT5G65700 46.746 9.77e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1831 Pkinase 1.3e-20 CL0016