Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1829 ATGGACACCGTGAGGACCACCCGCGTGCTTTCGGCCACCCTCTGGCTCTTTCAGGACATGTCCCCACACGTTAAGTTGGAGCACTTCCCGCAAACCAGGCTATCCTGGACCGTGGCCACCGAGAGGCGAGTCCACATCATGGACTATGACATCATGGAAGAGATTGCTTACATTATGGAAGCGAATGAGAAATGTGATGTCTATAGCTTTGGAGTGTTGTCTTTGGAGATCATTATGGGAATACATCCAGGAGAGCTTATTTTATCTTTGATAGATAAATCATCAACCACATTTGATTTGCTGTTAAAGGATGTGTTGGACCCACGACTTTCACTACGCAGAAAATCAATTCTTGATGAGGTTATTGCAGTTGTAAAAATAGCATTTTCTTGTTTGAATGAGAATCCTGGATCTCGTCCAACCATGGAACAAGTATCTAAGGACCTTGCACGACAACCAAAGTCTCATATGGAAGATCCCTTTGTCACTATCACACTTGGACAGCTAATGAAGGATTAA 519 0.4393 MDTVRTTRVLSATLWLFQDMSPHVKLEHFPQTRLSWTVATERRVHIMDYDIMEEIAYIMEANEKCDVYSFGVLSLEIIMGIHPGELILSLIDKSSTTFDLLLKDVLDPRLSLRRKSILDEVIAVVKIAFSCLNENPGSRPTMEQVSKDLARQPKSHMEDPFVTITLGQLMKD 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1829 172 Gene3D Transferase(Phosphotransferase) domain 1 19 151 - -
Lele04g1829 172 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1829 172 SUPERFAMILY Protein kinase-like (PK-like) 59 156 IPR011009 -
Lele04g1829 172 PANTHER LEUCINE RICH REPEAT KINASE 2 53 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1829 Lele-ChrLele04 22706689 22711565 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1829 3 153 Receptor kinase-like Gene Family AT2G01210 30.303 3.75e-15 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1829 PK_Tyr_Ser-Thr 3.8e-05 CL0016