Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1826 ATGGAAGCGAACGAGAAATGTGATGTTTACAGCTTTGGAGTGTTGACTTTGGAGATCATTATGGGAATGCATCCAGGAGAGCTTATTTCATCTTTGATGGAGGAATCAACCCCGTATGATTCATTGTTAAAGGATGTGTTGGACCCACGACTTTCACCACCTAGAAAACTAATCCTTAATGAGGTTGTTGCAGTTGCGAAAATAGCATTTTCTTGTTTGAGTGAGAATCCTCGATCTCGTCCAACCATGGAACAAGTATCTACAGAGCTAGAACGGAGACCAAAATCTCATGTGGAAGATCCATTTGACACCATCACAATTGGACAACTAATGAAGGATTAA 342 0.4064 MEANEKCDVYSFGVLTLEIIMGMHPGELISSLMEESTPYDSLLKDVLDPRLSPPRKLILNEVVAVAKIAFSCLSENPRSRPTMEQVSTELERRPKSHVEDPFDTITIGQLMKD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1826 113 MobiDBLite consensus disorder prediction 77 98 - -
Lele04g1826 113 Pfam Protein tyrosine and serine/threonine kinase 3 90 IPR001245 GO:0004672|GO:0006468
Lele04g1826 113 PANTHER LEUCINE RICH REPEAT KINASE 2 1 93 - -
Lele04g1826 113 SUPERFAMILY Protein kinase-like (PK-like) 3 88 IPR011009 -
Lele04g1826 113 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1826 Lele-ChrLele04 22692591 22692932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1826 4 94 Receptor kinase-like Gene Family AT2G01210 40.196 7.07e-15 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1826 PK_Tyr_Ser-Thr 1.3e-06 CL0016