Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1823 ATGCATAAAATCAAATCTATTGCAGAGATATCTTTCATCATGACAGCTAACGAGAAATGTGATGTATATAGTTTTGGAGTGTTGACTTTAGAAATCATTATGGGTACACATCCCGTGGAGTTTATTTCATACTTGGCAGAGAAACCAACCAATGATGATTTGTTATTGAAGGATGTGGTAGATCCACGACTTTCTACCTTGAGACTCCAAAAACCAATTCTAGATTATGTTATCTTAGTTGCAAAAATAGCATTTTCTTGCTTAAATGAGAATCCTCGGTCTCGTCCAACTATGGAACAAGTATCCATAGAGCTTTCAAGGCCACCAAAATCTCATTTTCAGGATCCATTTCATAATATCACAATTGGACAACTCATGAGGGATTGA 387 0.3592 MHKIKSIAEISFIMTANEKCDVYSFGVLTLEIIMGTHPVEFISYLAEKPTNDDLLLKDVVDPRLSTLRLQKPILDYVILVAKIAFSCLNENPRSRPTMEQVSIELSRPPKSHFQDPFHNITIGQLMRD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1823 128 Gene3D Transferase(Phosphotransferase) domain 1 8 119 - -
Lele04g1823 128 Pfam Protein tyrosine and serine/threonine kinase 13 103 IPR001245 GO:0004672|GO:0006468
Lele04g1823 128 PANTHER LEUCINE RICH REPEAT KINASE 2 12 111 - -
Lele04g1823 128 SUPERFAMILY Protein kinase-like (PK-like) 15 102 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1823 Lele-ChrLele04 22651287 22651673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1823 9 111 Receptor kinase-like Gene Family AT1G75820 37.391 7.72e-14 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1823 PK_Tyr_Ser-Thr 2.5e-06 CL0016