Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1822 ATGCATCATGGCTGTTTGATTCCTATTATTCATCGCGACGTATCAAGCAAGAATGTTCTCCTTAGTTCAGAATATGAAGAAGCTCGCATCGTTGACTTTGGAACTGCGAAGTTTTTGAATCCTAATTCAAACAATATAACCACATTTGCTGGTACATTCGGTTATGCTGCTCCAGAGATTGCTTTCATTATGAAAGCAAACGAAAAATGTGATGTATACAGCTTTGGAGTGTTGACCTTAGAAATCATCATGGGAAATCATCCAGCAGAGCTTGTTTCATCTTTGGCAGAGAATTCAACCACTATAGATCTGTTGTTAAAGGAGGTGTTGGACCCACGACTTTCTCCACCCACAAAACCAATCCTAGACAATGTGATCTTAGTTGCAAAAATAGCTTTTTCTTGCTTGCATGAGACTCCTCAGTCCCGTCCAACCATGGAACAAGTATCTACGGAGCTTGCAAGGACAGTAAAATCTTATTCAGAGGATCAATTTAACACCATCACACTTGGACAACTAATGAGGGATTGA 531 0.3992 MHHGCLIPIIHRDVSSKNVLLSSEYEEARIVDFGTAKFLNPNSNNITTFAGTFGYAAPEIAFIMKANEKCDVYSFGVLTLEIIMGNHPAELVSSLAENSTTIDLLLKEVLDPRLSPPTKPILDNVILVAKIAFSCLHETPQSRPTMEQVSTELARTVKSYSEDQFNTITLGQLMRD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1822 176 PANTHER LEUCINE RICH REPEAT KINASE 2 1 157 - -
Lele04g1822 176 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1822 176 SUPERFAMILY Protein kinase-like (PK-like) 1 151 IPR011009 -
Lele04g1822 176 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele04g1822 176 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1822 176 Gene3D Transferase(Phosphotransferase) domain 1 1 171 - -
Lele04g1822 176 Pfam Protein kinase domain 9 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1822 Lele-ChrLele04 22620457 22621067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1822 1 149 Receptor kinase-like Gene Family AT5G49660 41.250 1.26e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1822 Pkinase 5.3e-22 CL0016