Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1820 ATGCATCATGGCTGTTCAATTCCTATTGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTAAGTTCTGAATATGAAGAAGCTCACATCATTGACTTTGGAACGGCGAAGTTTTTGGATCCCAACTCAAACAATATGACCACATTTGCTGGAACATTCGGGTATGCTGCACCAGAGATTGCTTTCATTATGAAAGCGAACGAGAAATGTGATGTTTATAGCTTTGGAGTGTTGACTTTAGAAATAATTATGGGAGAACATCCGGCAGAGCTTATTTCATCTTTGAAAGAGAATTCAACCAATAATGATTTGTTATTAAAGGATGTGTTGGACCCACGACTTTCTCCACCCGCAAAACCAATACTAGATGATGTGATCTTAGTTGCAAAAATAGCATTTTCTTGTTTGAGTGAGGCTCCTCGGTCTCGTCCAACCATGGAAGAAGTATCTACAGAGTTTGCAAAGACACCAAGATTTTATTCAGAGGATCAATTTCACACCATAACAATAGGACAACTAATGAGGGATTGA 531 0.3842 MHHGCSIPIVHRDISSKNVLLSSEYEEAHIIDFGTAKFLDPNSNNMTTFAGTFGYAAPEIAFIMKANEKCDVYSFGVLTLEIIMGEHPAELISSLKENSTNNDLLLKDVLDPRLSPPAKPILDDVILVAKIAFSCLSEAPRSRPTMEEVSTEFAKTPRFYSEDQFHTITIGQLMRD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1820 176 Coils Coil 174 176 - -
Lele04g1820 176 Pfam Protein kinase domain 8 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1820 176 Gene3D Transferase(Phosphotransferase) domain 1 1 168 - -
Lele04g1820 176 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele04g1820 176 SUPERFAMILY Protein kinase-like (PK-like) 1 150 IPR011009 -
Lele04g1820 176 SMART serkin_6 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1820 176 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1820 176 PANTHER LEUCINE RICH REPEAT KINASE 2 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1820 Lele-ChrLele04 22579169 22579792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1820 1 164 Receptor kinase-like Gene Family AT5G65700 42.857 1.88e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1820 Pkinase 1.3e-21 CL0016