Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1818 ATGGGGTGTTTTGATAGCGAAATGTTGCATCAAAAAGTTGTTGAGGCTACAGAGGATTTTGATGACAAATATCTTGTTGGGGTTGGAGGACAAGAGATTGCTTTTACAATGCAAGCAAATGAGAAATGTGATGTTTATAGTTTTGGTGTTCTCACATTTGAAATTCTAATTGGAAAACATCCAGGAGACTTCATTTGTTACTTAGCAGATATCCCAACATCCTATGATTTGCCACTTAAGGATGCATTAGATCAGCGACTTCCTGCACCCTCACGCCTAGTTTCTGAGGAAGTAATGTTAATTGCAAAAATTGCACTTGCTTGCCTGAATGAAGATCCTCGGTGCCGACCAACCATGGAACAAGTATCTCTGGAACTTGCGAGGTCTAAACCTTATTCACTGAACCTGTTTGACAACATCACACTTGGACAACTCGTGAGAGCTTAA 447 0.4027 MGCFDSEMLHQKVVEATEDFDDKYLVGVGGQEIAFTMQANEKCDVYSFGVLTFEILIGKHPGDFICYLADIPTSYDLPLKDALDQRLPAPSRLVSEEVMLIAKIALACLNEDPRCRPTMEQVSLELARSKPYSLNLFDNITLGQLVRA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1818 148 Pfam Protein tyrosine and serine/threonine kinase 32 124 IPR001245 GO:0004672|GO:0006468
Lele04g1818 148 PANTHER LEUCINE RICH REPEAT KINASE 2 32 130 - -
Lele04g1818 148 Gene3D Transferase(Phosphotransferase) domain 1 27 136 - -
Lele04g1818 148 SUPERFAMILY Protein kinase-like (PK-like) 32 126 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1818 Lele-ChrLele04 22553620 22554646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1818 36 133 Receptor kinase-like Gene Family AT1G79680 36.190 2.95e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1818 PK_Tyr_Ser-Thr 3.6e-08 CL0016