Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1816 ATGCACCATGGTCTCTCATGTCCCATAGTTCATCGTGACATATCAAGCAAGAACATCCTATTAGATTCAGAATATCAAGAAGCTCATATCACTGACTTTGGAATAGCCAAGTTTCTAAAGCTTGACTCCAACAATATGACCTCATTCGTTGGTACTTACGGCTATACTGCTCCAGAGATTGTTTATACAATGCAAGCAAATGAGAAATGTGATGTTTATAGTTTTGGTGTTCTCACATTTGAAATTCTAATTGGAAGACATCCAGGAGACTTCATTTGTTTCTTATCGGAGATCCCAACATCCTATGATTTGCCACTTAATGATGTATTGGATCAGCGACTTCCTGCACCCTCACACCTAGTTTCTGTGGAAGTAATGTTAATTGCAAAAATTGCACTTGCTTGCCTGAATGAAGATCCTCGGTGCCGACCAACCATGGAACAAGTATCTTTGGAACTTGCGAGGGTGAATGTTGTTAGAGGTGTGGTTGACGCATTATTCCATATGCACCATGGTCTCTCATATCCCATAGTTCATCGTGACATATCAAGCAAGAACATCCTATTAGATTCAGAATATCAAGAAGCTCATATCACTGACTTTGGAATAGCCAAGTTTCTAAAGTTTGACTCCAACAATAGGACCTCATTCGCTTACACCTATGGTTATGCTGCTCCAGAGATTGCTTATACAAAGCAAGAGAATGAGAAATGCGATGTCTACAGTTTTGGTGTTCTCACATTGGAAATTCTAATGGGAAGACATCCAAGAGAATTCATTTGTTCTTTGACAGAGAGTCCGACATCCTATGATTTGTCACTTAAGGATGTGTTGGATGAGTGTCATGTCCTGAAAATTAAAGGTGACCGGCACAAAATGTGA 882 0.3968 MHHGLSCPIVHRDISSKNILLDSEYQEAHITDFGIAKFLKLDSNNMTSFVGTYGYTAPEIVYTMQANEKCDVYSFGVLTFEILIGRHPGDFICFLSEIPTSYDLPLNDVLDQRLPAPSHLVSVEVMLIAKIALACLNEDPRCRPTMEQVSLELARVNVVRGVVDALFHMHHGLSYPIVHRDISSKNILLDSEYQEAHITDFGIAKFLKFDSNNRTSFAYTYGYAAPEIAYTKQENEKCDVYSFGVLTLEILMGRHPREFICSLTESPTSYDLSLKDVLDECHVLKIKGDRHKM 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1816 293 SUPERFAMILY Protein kinase-like (PK-like) 1 150 IPR011009 -
Lele04g1816 293 Pfam Protein kinase domain 6 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1816 293 Pfam Protein kinase domain 157 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1816 293 PANTHER LEUCINE RICH REPEAT KINASE 2 1 153 - -
Lele04g1816 293 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1816 293 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele04g1816 293 SMART serkin_6 78 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1816 293 SUPERFAMILY Protein kinase-like (PK-like) 154 279 IPR011009 -
Lele04g1816 293 Gene3D Transferase(Phosphotransferase) domain 1 1 154 - -
Lele04g1816 293 Gene3D Transferase(Phosphotransferase) domain 1 155 287 - -
Lele04g1816 293 ProSitePatterns Tyrosine protein kinases specific active-site signature. 177 189 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1816 Lele-ChrLele04 22527620 22531985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1816 154 256 Receptor kinase-like Gene Family AT5G49660 49.524 1.52e-25 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1816 Pkinase 6.8e-23 CL0016