Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1815 ATGCACCATGGTCTCTCATGTCCCATAGTTCATCGTGACATATCAAGTAAGAACATACTGTTAGATTTAGAATATGAAGAAACTCGTATCACTGACTTTGGAATAGCCAAGTTTCTAAAGCTTGACTCCAACAACATGACCTCATTCGCTGGCACCTATGGTTATGCTGCTCCAGGTGAGGCCTCCTTTCTTTGTAGCCAAAAATCATTGTTATTATTATTCTATGCAATGCAATATAACTATATATATTCTAATAGTTTCACTTGCTTAATTGAAGCAGAGATTGCTTATACAATGCAAGCAAATGAGAAATGTGATGTTTACAGTTTTGGTGTTCTCACATTAGAAATTCTAATGGGAAGACATCCTGGAGAGTTCATTTGTTCCTTAGCAGAGATCCCAACATCCTATGATTTGCCACTTAAGGAGGTGTTGGATCAACGACTTCCTGCACCCTCAAACCAAGTTGTCAAGGAAGTAATGTTAATTGCAAAAATAGCACTTGCTTGCCTGAATGAAGATCCTCGGTGCCGACCAACCATGGAACAAGTCTCTTTAGAACTTGCGAGGTCTAAGCCTTATTTGGCGAACCAGTTCAACAACATCACATTTGGACAACTCATGAGAGCTTAA 633 0.3918 MHHGLSCPIVHRDISSKNILLDLEYEETRITDFGIAKFLKLDSNNMTSFAGTYGYAAPGEASFLCSQKSLLLLFYAMQYNYIYSNSFTCLIEAEIAYTMQANEKCDVYSFGVLTLEILMGRHPGEFICSLAEIPTSYDLPLKEVLDQRLPAPSNQVVKEVMLIAKIALACLNEDPRCRPTMEQVSLELARSKPYLANQFNNITFGQLMRA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1815 210 Pfam Protein tyrosine and serine/threonine kinase 94 186 IPR001245 GO:0004672|GO:0006468
Lele04g1815 210 SUPERFAMILY Protein kinase-like (PK-like) 3 186 IPR011009 -
Lele04g1815 210 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele04g1815 210 Gene3D Transferase(Phosphotransferase) domain 1 1 203 - -
Lele04g1815 210 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1815 210 Pfam Protein kinase domain 6 58 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1815 210 PANTHER LEUCINE RICH REPEAT KINASE 2 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1815 Lele-ChrLele04 22515462 22516094 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1815 1 193 Receptor kinase-like Gene Family AT5G49660 35.961 2.27e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1815 PK_Tyr_Ser-Thr 7.3e-07 CL0016