Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1812 ATGCACCATGGTCTCTCATGTCCCATAGTTCATCGTGACATATCAAGTAAGAACATACTGTTCGATTCAGAATATGAAGAAGCTTATATCACTGACTTTGGAATAGCCAAGTTTCTAAAGCTTGACTCCAACAACATGACCTCATTCGCTGGCACCTATGGTTATGCTGCTCCAGAGATTGCTTATACAATGCAAGCAAATGAGAAATGTGATGTTTATAGTTTTGGTGTTCTCACATTAGAAATTCTAATGGGAAGACATCCAGGAGAGTTCATTTGTTCCTTAGCAGAGATCCCAACATCCTATGATTTGCCACTTAAGGATGTGTTGGATCAACGACTTCCTGCACCCTCAAACCAAGTTGTCAAGGAAGTAATGTTAATTGCAAAAATAGCACTTGCTTGCCTGAATGAAGATCCTCGGTGCCGACCAACCATGGAACAAGTATCTTTAGAACTTGTGAGGTCTAAGCCTTATTTGACGAACCAGTTCAACAACATCACATTTGGACAACTCATGAGAGCTTAA 528 0.4034 MHHGLSCPIVHRDISSKNILFDSEYEEAYITDFGIAKFLKLDSNNMTSFAGTYGYAAPEIAYTMQANEKCDVYSFGVLTLEILMGRHPGEFICSLAEIPTSYDLPLKDVLDQRLPAPSNQVVKEVMLIAKIALACLNEDPRCRPTMEQVSLELVRSKPYLTNQFNNITFGQLMRA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1812 175 PANTHER LEUCINE RICH REPEAT KINASE 2 1 158 - -
Lele04g1812 175 SMART serkin_6 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1812 175 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1812 175 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele04g1812 175 SUPERFAMILY Protein kinase-like (PK-like) 1 151 IPR011009 -
Lele04g1812 175 Pfam Protein kinase domain 6 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1812 175 Gene3D Transferase(Phosphotransferase) domain 1 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1812 Lele-ChrLele04 22492525 22493155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1812 1 149 Receptor kinase-like Gene Family AT5G65700 44.654 9.82e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele04g1812 Pkinase 3.5e-22 CL0016