Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1798 ATGAAATCATTTGGCTTGTCCGCCGAAGTTGCTGGTAAATTATTGAAAAGGGTTGAACTGAACCCAGATAAGCCGAACTCCGTACTTAATCTTCTCAGAAGCTACGGATTCTCAGATACTCAGATATCCAAAATTGTGAAAGGCTATCCCCAGGTGCTTGTGGCAAATCCTGAGCAGAGCCTTTTGCCCAGGCTACGGTTTATCCAGTCTATAGGGTTTTCAGCTTCTGAAATCCCGGAACTCTTCTCGTATAACCCTGCATTACTATCACAAAGCTTAGAGAAACGCATAATTCCCAGCTATGAGGCCCTTAAAATTGTATTTGATGATGATTTGAAAGTAAGGAAATGTCTAAAATGCTTTACTTGGAGTATTGGCTCCTATGATGTAAAGAATTTATTTCCGAACATAAAGGTTTTGAGAGATGAAGGAGTGTCTCAATCTTCTGTCTTTGGTCTGTTAACTAGACGTCCAGCTGTAGCATTTATGAACCGATCACTGTTTGTTGAATATGTCAAGTTTGTCAAGGAAACAGGAATCAAACCTTCCAAAGCTGGGTTTGTTGATGCCATTATAGTTGTAACACAGTTGAGTAAATCAACCTGGGAGTTGAAACTGGATATCTTTGAGAGGTGTGGCTGGTCCAGGGATGTCACTCTTTTGGCATTCAGTAAGTTTCCAAATATCATGAGTATGTCAGAGGAAAAAATCACAAACACAATGAAGTTTTTTGTGGATGAAATGGGTTTACGGTTGGAAGTTGTAGCTGGATGCCCAACAATTCTTAGTTATAGCTTGAAGCAGAGGATTGCTCCTAGATGGTCAGTAGTTAAAATTTTGAAAATGAAGGGATTCATCATGGAAAAAGTGTCCCTAAATTCTGTTATTATAATCAGTGAGGAAAAGTTTCTGGAAAATTTTGTGATTAAGTTTCAAGAAAATGTTCCTCAGCTACTGAAAATCTATAGAGGTGAATTGAGATCTTTACCTGAAGTTCAGGCTTAG 1005 0.3871 MKSFGLSAEVAGKLLKRVELNPDKPNSVLNLLRSYGFSDTQISKIVKGYPQVLVANPEQSLLPRLRFIQSIGFSASEIPELFSYNPALLSQSLEKRIIPSYEALKIVFDDDLKVRKCLKCFTWSIGSYDVKNLFPNIKVLRDEGVSQSSVFGLLTRRPAVAFMNRSLFVEYVKFVKETGIKPSKAGFVDAIIVVTQLSKSTWELKLDIFERCGWSRDVTLLAFSKFPNIMSMSEEKITNTMKFFVDEMGLRLEVVAGCPTILSYSLKQRIAPRWSVVKILKMKGFIMEKVSLNSVIIISEEKFLENFVIKFQENVPQLLKIYRGELRSLPEVQA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1798 334 Pfam mTERF 29 239 IPR003690 GO:0003690|GO:0006355
Lele04g1798 334 Pfam mTERF 196 304 IPR003690 GO:0003690|GO:0006355
Lele04g1798 334 Gene3D Transcription termination factor 3, mitochondrial 110 315 IPR038538 -
Lele04g1798 334 PANTHER CGI-12 PROTEIN-RELATED 2 310 IPR003690 GO:0003690|GO:0006355
Lele04g1798 334 SMART mt_12 151 181 IPR003690 GO:0003690|GO:0006355
Lele04g1798 334 SMART mt_12 79 111 IPR003690 GO:0003690|GO:0006355
Lele04g1798 334 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Lele04g1798 334 SMART mt_12 43 74 IPR003690 GO:0003690|GO:0006355
Lele04g1798 334 SMART mt_12 115 146 IPR003690 GO:0003690|GO:0006355
Lele04g1798 334 SMART mt_12 252 286 IPR003690 GO:0003690|GO:0006355
Lele04g1798 334 FunFam Mitochondrial transcription termination factor-like 93 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1798 Lele-ChrLele04 22343345 22344349 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele04g1798 mTERF 1.4e-25 No_clan