Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1796 ATGCTAAATTTTCCGTTTGCAAGATTATCGTCGTCCCTGCCATGCTGGAGGACAACCCAGTTATGGTTTCTTCGTCGCAATGCATATCACATTTCCTATTCGTTTTCTTCTGCTGCGAAATTATCTCAATCAAATCCACCAGAACAAAACAGAGATGGAATTTTTACTTTTACGGTTTCCTATCTCATGAACAAATTTGGCTTGTCCGCCGAAGTTGCTGGTAAATTATCGAAAAGGTTGGAACTGAAAGACCCAGATAAACTCGACTCCGTACTTAGTCTTCTCAGAAGCTACGGATTCTCCGATACTCAGATATCCAAAATTGTGAAATGGTTTCCCGAAGTGCTTGTAGCAAATCCTGAGAAGAGGCTTTTGCCCAAACTGAGGTTTATCCGTTCTATAGGATTTTCAGCTTCTGAACTCCCAGAACTATTCTCTACTAACCCTACATTACTAGTTCTAAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCCCTTAAAGGGGTACTCGGTGATGATTGGAAAGTAAAGAGATGTTTGAAAGGCTCAAGGTGGAACGTTCGCTCCTATGGTGTAACGAATATAGTTCCAAACATAAAGGTTTTGAGAGATGAAGGAGTGCCTCAATCTTTTGTCTTTGCTCTGTTGTCTAGAAGAGCAAATGTAGCATTTTTAAACCAATCAAAGTTTGTTGATAATGTCAAGTTTGTCAAGAAAACCGGAATTGAACCTTTCAAGGGTGCGTTCATTGAGGCTCTTGCAATTGTAACACTGGTGGGTAAATCATCCTGGGAGTTAAAACTGGGTATCTATGAGAGGTTGGGTTGGTCCAGGGATGTCACTCTTTTGGCATTCAGGAAGTTTCCAAATATCATGAGCATGTCAGAGGAAAAAATCACAAACACAATGAAGTTTTTTGTGGATGAAATGGGTTTACGGTTGGAAGATATAGCTGGATGCCCAACAATTCTTGGCTATAACTTGAAGCAGAGGATTGTTCCTAGATGGACAGTAGTTAAAATTTTGAAAATGAAGGGATTAATTAAGGACAATGTTTCCCTACTTACCGTTATAATTGTGAGTGAGAAAAAGTTTCTGGAAAATTTTGTGATCAAATTTCAGGAAAGTGTTCCTCAGCTACGGAAACTCTATAGCGGTGAATTGAGATCTTTACCTGGAGTTTTGGCGTAG 1194 0.397 MLNFPFARLSSSLPCWRTTQLWFLRRNAYHISYSFSSAAKLSQSNPPEQNRDGIFTFTVSYLMNKFGLSAEVAGKLSKRLELKDPDKLDSVLSLLRSYGFSDTQISKIVKWFPEVLVANPEKRLLPKLRFIRSIGFSASELPELFSTNPTLLVLSLEKRIIPHYEALKGVLGDDWKVKRCLKGSRWNVRSYGVTNIVPNIKVLRDEGVPQSFVFALLSRRANVAFLNQSKFVDNVKFVKKTGIEPFKGAFIEALAIVTLVGKSSWELKLGIYERLGWSRDVTLLAFRKFPNIMSMSEEKITNTMKFFVDEMGLRLEDIAGCPTILGYNLKQRIVPRWTVVKILKMKGLIKDNVSLLTVIIVSEKKFLENFVIKFQESVPQLRKLYSGELRSLPGVLA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1796 397 FunFam Mitochondrial transcription termination factor-like 156 378 - -
Lele04g1796 397 SMART mt_12 214 244 IPR003690 GO:0003690|GO:0006355
Lele04g1796 397 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
Lele04g1796 397 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Lele04g1796 397 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Lele04g1796 397 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Lele04g1796 397 Pfam mTERF 92 302 IPR003690 GO:0003690|GO:0006355
Lele04g1796 397 Pfam mTERF 273 367 IPR003690 GO:0003690|GO:0006355
Lele04g1796 397 Gene3D Transcription termination factor 3, mitochondrial 57 181 IPR038538 -
Lele04g1796 397 Gene3D Transcription termination factor 3, mitochondrial 182 378 IPR038538 -
Lele04g1796 397 PANTHER CGI-12 PROTEIN-RELATED 58 373 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1796 Lele-ChrLele04 22337280 22338473 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele04g1796 mTERF 6.7e-26 No_clan