Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1794 ATGCTACATTTTCTGATTGCAAGATTATCTTTGTCGCGGGCTTGCTGGAGGACAACCCAGTTAGGGTTTTTTCATCCCAATGCATCCCACATTTCCTATTCGTTTTCTTCTGTTGCGAAATTATCTCAATCAAATCAACCAGAACAAAACAGAGCTGGAAATTTTTTGTTTACAGTTTCTTATCTCATGAACACATTTGGCTTGTCCGCCGAAGTTGCTAGTAAAGTATCGAAAAGGGTTGAACTGAACCCAGATAAGCCGGACTCCGTACTTAATCTTCTCAGAAGCTACGGATTCTCGGATACTCAGATATCCAAAATTGTGAAATGCTTTCCCCAAGTGCTTGTAGCAAATCCTGAGCAGAATCTTTTGCCCAAACTGAGGTTTATCCGTTCTATAGGATTTTCAGCTTCTGAACTGCCAGAACTATTCTGTACTTACCCTACATTACTAATTTTAAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCCCTTAAAGGGGTACTCGGTGATGATTGGAAAGTTAAGAGATGTTTGAAAGGCTCAAGATGGAACGTTTCCTCCTATGGTGTAACGAATGTAGTTCCAAACATAAAGGTTTTGAGAGATGACGGGGTGCCTCCATCTTTGATCTTCTTTCTGTTATCTAGAAATGCAAATGTAGCATTTATCAATCAATCAAAGTTTGTTGATAACGTCAAGTTTGTCAAGGAAACAGGAATTGAACCTTTCAAGGTTGTGTTCATTGAGGCACTTGTAGCTGTTACACTGTTCGCTAAATCAACCTGGGAGTTGAAACTGGATATCTTTGAGAGATGTGGCTGGTCCAGGGATGTCACTATTTCTGCATTCAGTAAGTTTCCAAATATCATAAGGATGTCAGAGAACAAAATCACAAAAAATATAAAGTTTTTTGTGGATGAAATGGGTTTGCGGTTAGAAGATATAGCTGGATGCCCAACAATCTTCAGCTATAGTTTAAAGCGGAGGATTATGCCCAGATGGTCAGTAATTAAAATTTTGAAAATGAAGGGTTTAATCAAGGCTAATGTGTCCTTACCTTCTATGATGATTATTAGCGAGAAGAAGTTTCGGGAAAATTTTGTGATCAAATTTCAGGAAAGCGTTCCTCAGCTACTGGAACTCTATAGCGGTGAATTGAGACCTGTACCTGAAGTTTAG 1185 0.3899 MLHFLIARLSLSRACWRTTQLGFFHPNASHISYSFSSVAKLSQSNQPEQNRAGNFLFTVSYLMNTFGLSAEVASKVSKRVELNPDKPDSVLNLLRSYGFSDTQISKIVKCFPQVLVANPEQNLLPKLRFIRSIGFSASELPELFCTYPTLLILSLEKRIIPHYEALKGVLGDDWKVKRCLKGSRWNVSSYGVTNVVPNIKVLRDDGVPPSLIFFLLSRNANVAFINQSKFVDNVKFVKETGIEPFKVVFIEALVAVTLFAKSTWELKLDIFERCGWSRDVTISAFSKFPNIIRMSENKITKNIKFFVDEMGLRLEDIAGCPTIFSYSLKRRIMPRWSVIKILKMKGLIKANVSLPSMMIISEKKFRENFVIKFQESVPQLLELYSGELRPVPEV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1794 394 Pfam mTERF 263 365 IPR003690 GO:0003690|GO:0006355
Lele04g1794 394 Pfam mTERF 91 245 IPR003690 GO:0003690|GO:0006355
Lele04g1794 394 Gene3D Transcription termination factor 3, mitochondrial 175 376 IPR038538 -
Lele04g1794 394 SMART mt_12 314 345 IPR003690 GO:0003690|GO:0006355
Lele04g1794 394 SMART mt_12 141 173 IPR003690 GO:0003690|GO:0006355
Lele04g1794 394 SMART mt_12 213 243 IPR003690 GO:0003690|GO:0006355
Lele04g1794 394 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Lele04g1794 394 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Lele04g1794 394 FunFam Mitochondrial transcription termination factor-like 155 377 - -
Lele04g1794 394 PANTHER CGI-12 PROTEIN-RELATED 58 372 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1794 Lele-ChrLele04 22330637 22331821 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele04g1794 mTERF 7e-21 No_clan