Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1793 ATGAACTCAATTGGCATGTCCGTCGAAGTAGCTTTTAAATTATCGAAAAGGCTTGAACTGAAAGACCCTGATAGACCCGACTCCGTCCTTAGTCTTCTCAGAAGCTACGGATTCTCAGATCCACAGATATCCAAACTTGTGGCACGCCGTCCACGGGTGCTTTTGGCAAATCCTGAGCACAATCTTTTTCCCAGGCTAAGATTTGTCCTGTCTATAGGGTTTTCAGCTGCTGAAATCCCAGAACTCTGCTGTTCAAACTCCACATTAATAACGTATAGCTTAGAGGAACATATAATTCCCCACTATGAGGCCATAAAAGGTGTACTTGATGATGATTGGAGAGTAAGGAAATGTCTAAAATGCTCTATTTGGAGTATTTGCTCCTATGATGTGAAGAATATAGTCCCAAACATAAAGGTTTTGAGAGATGAAGGAGTGCCTCAATCTCTGATCTTCTCTCTGTCATCTAGACGTGCAAATGTAGCATTTATGAATCAATCAATGTTTGGTGAATATGTCAAGGATGTCACTCTTTTGGAATTCAGTAAGTTTCCAACTGTGAGTTTGTCAGAGAAAAATATCACAAACACGATGAAGTTTTTGGTGGATGAAATGGATTTACAGTTGGAAGATACAGCTAGATACCCAAAAATTCTTAGCTTTAGCTTGAAGCAGAGGATTATTCCTAGATGGTCTGTTTTCAGAATTTTGAGAATGATGGGTTTAATCAAGGATAATATGTCCACTATTAACTTTATTAGTATGAGTGACACAAGGTTTATGAAAAATTTTGTGATCAAATTTCAGGAAAGTGTTCCTCGGCTACTGAAACTCTATAGAGGTGAATTGGGACCTTTACCTGAACTTCAGTTGCATAGGCATATGTTTGAGGCCAAATGTGCTTATGATGTTACTGTGAGGAAACAAGAACTGAAAAATTTTTGA 945 0.3831 MNSIGMSVEVAFKLSKRLELKDPDRPDSVLSLLRSYGFSDPQISKLVARRPRVLLANPEHNLFPRLRFVLSIGFSAAEIPELCCSNSTLITYSLEEHIIPHYEAIKGVLDDDWRVRKCLKCSIWSICSYDVKNIVPNIKVLRDEGVPQSLIFSLSSRRANVAFMNQSMFGEYVKDVTLLEFSKFPTVSLSEKNITNTMKFLVDEMDLQLEDTARYPKILSFSLKQRIIPRWSVFRILRMMGLIKDNMSTINFISMSDTRFMKNFVIKFQESVPRLLKLYRGELGPLPELQLHRHMFEAKCAYDVTVRKQELKNF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1793 314 Pfam mTERF 30 162 IPR003690 GO:0003690|GO:0006355
Lele04g1793 314 Pfam mTERF 185 260 IPR003690 GO:0003690|GO:0006355
Lele04g1793 314 Gene3D Transcription termination factor 3, mitochondrial 3 272 IPR038538 -
Lele04g1793 314 PANTHER CGI-12 PROTEIN-RELATED 2 267 IPR003690 GO:0003690|GO:0006355
Lele04g1793 314 SMART mt_12 120 147 IPR003690 GO:0003690|GO:0006355
Lele04g1793 314 SMART mt_12 178 208 IPR003690 GO:0003690|GO:0006355
Lele04g1793 314 SMART mt_12 209 243 IPR003690 GO:0003690|GO:0006355
Lele04g1793 314 SMART mt_12 80 112 IPR003690 GO:0003690|GO:0006355
Lele04g1793 314 SMART mt_12 44 75 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1793 Lele-ChrLele04 22328031 22329178 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele04g1793 mTERF 1e-14 No_clan