Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1792 ATGCTAACTTTTCTGATTGCAAGATCGTCTTCGTCCCTGCAGACGGGAACCAAGTTAGGGTTTCTTCGTCACAATGGACCCCACATTTCCTATTCGTTTTCTTCCTTTGGGAAATCATCTCAATCTAATCAATCCGAACAAAATCAAGAAAGAAATCAATCGCTCACAGTTTCTTACCTCGTGAACTCATGTGGCGTGTGCGCCGAAGTTGCTAGTGCCGTATCGAAAAGGATTAAATTGGAAGACTCAGATAAACCCAACTCGATACTTAATCTTCTCAGAAGTTACGGATTCTCTGATACACAGATATCCGAAACTGTGAGCAGGTTTCCCCGAGTGCTTTTGGTAGAGCCTGAGCATGACATCTTGCCCAAGCTAAGATTTATCCAGTCTATAGGGTTTTCAGCTTCTGAAATCCCAGAACTCCTATCGTATAAACCTGCATTACTATTACATAGCTTAGAGAAACGTATAATTCCCTACTATGAGGCCCTTAAAAGCGTCCTTGATGATGATTGGAAAGTAAGGAAATGCCTAAAATCCTCTAATTGGGGTATTTGCTCCTTTGATGTAACAAATATAGTCCCAAACGTTAAGGTTTTGAGAGATGAAGGAGTGCCTCAATCTTCTGTCTTCTATCTGTTATATAGACGTGCAAATTTGGCATTTATGGATCAATCAATGTTTGGTGAATATGTCGAGTTTGTCAAGGAAACAGGAATCAAACCTTTCGAGTTTGCGTTTGTGGAAGCACTTATAGTTGTAACACGGGTGAATAAATCAACCTGGGAGATAAAACTGGATATCTTTGAGAGGTTGGGCTGGTCCAGGGATGTCACTCTTTTGGCATTCAGGAAGCAACCGAAGATCATGGGTATATCAGAGGAAAAAATCATAAAAATTATGAAGTTTCTTGTGGATGAAATGGGTTTACGGTCAGAAGATATTGCTAGTTACCCAACAATTCTTTGCTATAGCATCAATCAGAGGATTATTCCTAGATGGTCAGTACTTAAAATATTGAAAATGAAGGGTTTGATCAAGGATGATATATCCTTGCTTAACATCGTTATTATGAGGGAGAAAAAGTTTCTGGAAGATTTTGTGATTAAATTTCAAGAAAGTGTTCCTCACCTACTGAAACTTTATAGAGATGAATCGAGACCTTTACCTGAAGTTCAGGCCTAG 1188 0.3923 MLTFLIARSSSSLQTGTKLGFLRHNGPHISYSFSSFGKSSQSNQSEQNQERNQSLTVSYLVNSCGVCAEVASAVSKRIKLEDSDKPNSILNLLRSYGFSDTQISETVSRFPRVLLVEPEHDILPKLRFIQSIGFSASEIPELLSYKPALLLHSLEKRIIPYYEALKSVLDDDWKVRKCLKSSNWGICSFDVTNIVPNVKVLRDEGVPQSSVFYLLYRRANLAFMDQSMFGEYVEFVKETGIKPFEFAFVEALIVVTRVNKSTWEIKLDIFERLGWSRDVTLLAFRKQPKIMGISEEKIIKIMKFLVDEMGLRSEDIASYPTILCYSINQRIIPRWSVLKILKMKGLIKDDISLLNIVIMREKKFLEDFVIKFQESVPHLLKLYRDESRPLPEVQA 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1792 395 Pfam mTERF 257 365 IPR003690 GO:0003690|GO:0006355
Lele04g1792 395 Pfam mTERF 90 300 IPR003690 GO:0003690|GO:0006355
Lele04g1792 395 Gene3D Transcription termination factor 3, mitochondrial 169 376 IPR038538 -
Lele04g1792 395 FunFam Mitochondrial transcription termination factor-like 154 376 - -
Lele04g1792 395 PANTHER CGI-12 PROTEIN-RELATED 53 371 IPR003690 GO:0003690|GO:0006355
Lele04g1792 395 SMART mt_12 140 172 IPR003690 GO:0003690|GO:0006355
Lele04g1792 395 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Lele04g1792 395 SMART mt_12 212 242 IPR003690 GO:0003690|GO:0006355
Lele04g1792 395 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Lele04g1792 395 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1792 Lele-ChrLele04 22324558 22325745 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele04g1792 mTERF 1.2e-28 No_clan