Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1791 ATGCTAATTTTTCTGATCGCAAGATTATCTTCTTCTCTGCGGACTGGAACCCAGTTAGGGTTTCTTCATCACTATGCATCCCACATTTCCTATTCGTTTTCTTTCGTTGCAAAATTATCTGGATCGAATCGATCTGAACAAAGTAGAGATGGAAATCATTCGTTTACGGTTTCTTACCTCATGAACTCTTGTGGCATGTCCGCCAAAGTTGCTAGTGAAGTATCGGAAAGGGTTGAACTGAAAGACTCAGTTAAACCCGATTCCGTTCTTAATATTCTTAGAAGCTATGGGTTCTCAGATCCACAGATATCCAAGACTGTGACATGCTATCCTCGGGTGCTTTTGGCAAATCCTGAGCTCAATCTTTTGCCCAGGCTAAGCTCGAGGTGGCATGCCCGCTCCTATGATGTGACGAATACAGTTCCCAACATAAAGGTTTTGAGAGATGAAGGACTTCCTCAATCTTTAGTCTTTTCTATGTTATGCAGAGGTGCGGATATAGCATTTATGAATCCCTCAATGTTTGTTGAGCGCCTTCCAAGGGATGTCACTATTTTGGCATTTAGTAAGACTCCATATATCATCATGGCTATGTCAGAGAAAAATATCACAAATACAATGAATTTTTTTATAGATGAAATGGGTTTGTGGTTGGAAGATATAGCGCGATACCCCAATATTCTTAGATATAGCTTGAAGAAGAGGATTGTTCCTAGATGGAAAGTGTTCCTCAACTACAGAAACTCTATAATGGTGAATTGGGACTTTTGCCTGAAGTTCTGGCGTAGGCAGTTTACTGGAGGTAACGTCTTTTCTTATGAAGCAGAGAAAGGGGCTAAAATCCCATATGTAATCTTAAATTTTCTTCAGAAGTTCTTCATAATCACCATCTTTGCTAGGAACTTGTTGATTTTGATGAGACTTGAGATTGCCCGACTCTACGATGTCAGAGTGGGAAAACCTTTCTGTAGCTTCCGAATGCAAAAGCGAAATTTGAGGAATTGGACCACTTGCGAGCTAGGGTTTCTTCATCACTATGCATCCCTCATTTTCTATTCGTTTTCTTCCGTTGCGAAATCATCTCGATCAAATCGAACAGAACAAACTAGTGATGGAAATAATTCGTTTACGGTTTCTTACCTCATGAACTCATGTGGCATGTCCGCCAAAGTTGCTAGTGAAGTATCGAATAGGGTTGAACTGAAAGACCTAGATCAACCTGATTCGAAAATAGGAGTTGAACCCTTCAAGTTTGCGTTTGTTGAAGCCCTTATAGTTGTAACACAATTGAGTAAATCAACCTGGGAGTTGAAACTGGATATCTTTGGGAGATTCGGCTGGTCCAGGAATGTCACTCTTTTGGCATTCAGTAAGACCCCAAATATCATGGCTTTGTCAGAGAAAAATATCACAAGCACAATGAAGTTTTCGATAGATGAAATGGGTCTGCGGTCGGAAGATATAGCCGGACGCCCAGATATTCTTTTGTATAGCTTGAAGAAGAGGATTGTGCCTAGATGGTCAGTAGTAAAAATTTTGAAAATGAAGGGTTTATTCAAGGATAATTTGTCCCTACCTTCCATCATTAATATGGGCGAGAAGAAGTTTCTAGAAAATTTTGTAATTAAATTTCAGGAAAGTGTTCCTCAGCTACCAAGACTTTATAGTGGTGAATTGGGACCTTTACCTGAAATTCTGGCGTAG 1704 0.3996 MLIFLIARLSSSLRTGTQLGFLHHYASHISYSFSFVAKLSGSNRSEQSRDGNHSFTVSYLMNSCGMSAKVASEVSERVELKDSVKPDSVLNILRSYGFSDPQISKTVTCYPRVLLANPELNLLPRLSSRWHARSYDVTNTVPNIKVLRDEGLPQSLVFSMLCRGADIAFMNPSMFVERLPRDVTILAFSKTPYIIMAMSEKNITNTMNFFIDEMGLWLEDIARYPNILRYSLKKRIVPRWKVFLNYRNSIMVNWDFCLKFWRRQFTGGNVFSYEAEKGAKIPYVILNFLQKFFIITIFARNLLILMRLEIARLYDVRVGKPFCSFRMQKRNLRNWTTCELGFLHHYASLIFYSFSSVAKSSRSNRTEQTSDGNNSFTVSYLMNSCGMSAKVASEVSNRVELKDLDQPDSKIGVEPFKFAFVEALIVVTQLSKSTWELKLDIFGRFGWSRNVTLLAFSKTPNIMALSEKNITSTMKFSIDEMGLRSEDIAGRPDILLYSLKKRIVPRWSVVKILKMKGLFKDNLSLPSIINMGEKKFLENFVIKFQESVPQLPRLYSGELGPLPEILA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1791 567 Gene3D Transcription termination factor 3, mitochondrial 342 547 IPR038538 -
Lele04g1791 567 Gene3D Transcription termination factor 3, mitochondrial 52 265 IPR038538 -
Lele04g1791 567 Pfam mTERF 195 245 IPR003690 GO:0003690|GO:0006355
Lele04g1791 567 Pfam mTERF 427 537 IPR003690 GO:0003690|GO:0006355
Lele04g1791 567 SMART mt_12 104 153 IPR003690 GO:0003690|GO:0006355
Lele04g1791 567 SMART mt_12 453 484 IPR003690 GO:0003690|GO:0006355
Lele04g1791 567 SMART mt_12 185 217 IPR003690 GO:0003690|GO:0006355
Lele04g1791 567 SMART mt_12 485 516 IPR003690 GO:0003690|GO:0006355
Lele04g1791 567 SMART mt_12 218 250 IPR003690 GO:0003690|GO:0006355
Lele04g1791 567 PANTHER CGI-12 PROTEIN-RELATED 53 126 IPR003690 GO:0003690|GO:0006355
Lele04g1791 567 FunFam Mitochondrial transcription termination factor-like 395 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1791 Lele-ChrLele04 22318220 22322217 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele04g1791 mTERF 2.4e-12 No_clan