Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1784 ATGGAGGATGAAAGTAAGGTGATGAATAACAACATGATGAGGTCATCAGAAGAAGATCATGAGGAAGATGACGATGAAGGAGGGAAGCTTCCAGGGTTCAGATTCCATCCAACAGATGAAGAACTGGTAGGGTTTTATCTGAGAAGGAAGGTGGAGAAGAAGCCTCTTCGAATCGAACTCATCAAACACATTGATATCTACAAATACGATCCCTGGGATCTCCCAAAGGCGAGCGGGATCGTTGGGGAGAAGGAATGGTATTTCTTCTGCAAGAGAGGGAGGAAATACAGAAACAGCATAAGGCCAAACAGGGTCACTGGCTCTGGCTTCTGGAAAGCCACTGGCATTGACAAGTCCATTTACAATAATGCCCTCACCCACTGCATTGGCCTCAAGAAGTCCCTAGTTTATTATAGGGGCACTGCTGGTAAAGGCACCAAGACCGATTGGATGATGCATGAATTTCGCCTCCCTCCTAATAGTAACCCTACCACCACCACCAATCATCTTCAAGAAGCTGAAGTGTGGACGCTTTGCAGAATATTCAAACGAATTCCATCCTACAGAAAATACACACGGACTTCCAAAGTTACAACAACAACAAATTCAAGAAATTCTAAAACATTAGAATTTGATAAATACGAAGACGACGACAAGCCTTACAGCTCGACTTGTTTCAGATCATCGCCATCGTCGTCATACTCTACTATTACCCATCATCTTGAAAGAAAATTACCAGTTCTTAATGATGAAAGAAGCCAGTTTTTTCTGGGTCAGTTTGCTGCTCATCATCAAGCTCCTTCATCAATGGTGACTAATAATAATAGTTATTATAACCACAGCTTCTTGAATCATAATCAGAATGTGGAAGATGTGCTTGCTAATGGTAATTGGGATGAACTCAGATCTGTCGTTCAGTTTGCTGCTGATCATTCCACTGTTTCATGA 948 0.4219 MEDESKVMNNNMMRSSEEDHEEDDDEGGKLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKHIDIYKYDPWDLPKASGIVGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKSIYNNALTHCIGLKKSLVYYRGTAGKGTKTDWMMHEFRLPPNSNPTTTTNHLQEAEVWTLCRIFKRIPSYRKYTRTSKVTTTTNSRNSKTLEFDKYEDDDKPYSSTCFRSSPSSSYSTITHHLERKLPVLNDERSQFFLGQFAAHHQAPSSMVTNNNSYYNHSFLNHNQNVEDVLANGNWDELRSVVQFAADHSTVS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1784 315 MobiDBLite consensus disorder prediction 1 17 - -
Lele04g1784 315 FunFam NAC domain-containing protein 35 38 187 - -
Lele04g1784 315 ProSiteProfiles NAC domain profile. 29 184 IPR003441 GO:0003677|GO:0006355
Lele04g1784 315 Pfam No apical meristem (NAM) protein 31 157 IPR003441 GO:0003677|GO:0006355
Lele04g1784 315 Gene3D NAC domain 38 187 IPR036093 GO:0003677|GO:0006355
Lele04g1784 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 28 267 - -
Lele04g1784 315 MobiDBLite consensus disorder prediction 1 31 - -
Lele04g1784 315 SUPERFAMILY NAC domain 29 183 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1784 Lele-ChrLele04 22282276 22287015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1784 12 184 NAC Transcription Factor Family AT5G39820 57.368 5.93e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele04g1784 NAM 1.4e-35 No_clan