Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1774 ATGGAGAATGAGAAGGATCATTACTACGATCAGAATGATCTTAACACTTTCTATTACAACCATCACCAGAACCTCGTTCAAGGGTTTGACCATCATCATCATCATCATCCTTCTTCACAACAACAACAACAGCGAACGGCGAGCTTAACAGATTGCTTGAATGGTGGGTTCATGGACTATAATGTTCTCTCAAGAGCCTTTGACTTGTCTTGTTCATCAGCATCTGAAGCGATCTCCTCCTCCATTAACGGCGGCGGCGATGAACTCATCAATCCAAAGAATAAGCCACCGGCAGCCACTACTAGTCCTACGTCGACTACTGTCGGAGATTCTCAAGTTGGCCTCAATAATTCCTCTGTGTCGAATTCATCTTCTAATTATGAAGCAGAAGTAAAAGCAGTGATAACAGAAGAATTAGAGAACAAGGCAAAAGGGAATAATAATAAGAAAGAGAAAAAGGCAAGAGAACCGCGTTTCGCGTTCTTGACTAAAAGTGAGGTGGATCACTTAGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCCGTCAAGAACAGTCCTTACCCAAGGAGTTATTATAGATGCACCAGTCAAAAGTGCAATGTGAAGAAGAGAGTGGAGAGGTCATTCCAGGATCCATCAATTGTGGTGACAACATATGAAGGGCAGCACAACCACTATTGTCCGGCGACACTCCGGGGAAGCGCCAACTCCGCCATGATGTTATCATCCGCGGCGATGGCGGGATCACCTAATTCCCTTTTCGGTTCTCCGCCGCTGGGGAGGACAACGGCCATGTTTCCCCAGGAACTTCTAGCTCAGTTTCTTCCAAGTTATCAAGGAGATGATCATCTTCATCATCAACAAAACCATCCCATGTTCCACCAACAAAACCCTAATAATAGTCACCATCACCAGCAAGTCCCTCATCACGACCATGGCTTGTTGCATGACCTGTTACCTCCTTCTTCTTCATCCTTCCCTGGTAGACAACAAGAGCCATGA 1008 0.4514 MENEKDHYYDQNDLNTFYYNHHQNLVQGFDHHHHHHPSSQQQQQRTASLTDCLNGGFMDYNVLSRAFDLSCSSASEAISSSINGGGDELINPKNKPPAATTSPTSTTVGDSQVGLNNSSVSNSSSNYEAEVKAVITEELENKAKGNNNKKEKKAREPRFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCNVKKRVERSFQDPSIVVTTYEGQHNHYCPATLRGSANSAMMLSSAAMAGSPNSLFGSPPLGRTTAMFPQELLAQFLPSYQGDDHLHHQQNHPMFHQQNPNNSHHHQQVPHHDHGLLHDLLPPSSSSFPGRQQEP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1774 335 ProSiteProfiles WRKY domain profile. 165 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1774 335 SUPERFAMILY WRKY DNA-binding domain 163 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1774 335 Gene3D WRKY domain 156 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele04g1774 335 MobiDBLite consensus disorder prediction 83 127 - -
Lele04g1774 335 MobiDBLite consensus disorder prediction 282 335 - -
Lele04g1774 335 MobiDBLite consensus disorder prediction 95 127 - -
Lele04g1774 335 Pfam WRKY DNA -binding domain 171 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele04g1774 335 Coils Coil 136 156 - -
Lele04g1774 335 FunFam WRKY transcription factor 57 156 230 - -
Lele04g1774 335 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 23 299 IPR044810 GO:0003700
Lele04g1774 335 SMART WRKY_cls 170 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1774 Lele-ChrLele04 22195017 22196893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1774 29 322 WRKY Transcription Factor Family AT1G29860 43.289 2.40e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele04g1774 WRKY 1.7e-25 CL0274