Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1773 ATGCCGTCCAATAGTTCTTTGAATGCGCAGCTGTCTAAGAAGACGACGTTTTTGGGTTTGAAACTATGGGTCTTAATTGGGATAGGTGTGGGTGCATTTATAGTCCTGATTCTTTGTATATTATCTATATGGGTGATGTTTTGGAGAAAGTCAAAGAGATCGCCGAACAAACACACTGCATCACAAATACCGAATGTGTCGAAAGATATCAAGGTCGATAAGGTTGGAGTGCAGAGTTCTTATAGTCACCCAGAAAATGTATATGTTCAACCCTTTCATGAGAAGGCAAGTGATAAGAATCCAGATAAGGTGTTAGTTCAGTCAGACATGAGCAAATGCAGTGATCCGGAAAATATCAGTCAGGGAAGTTCGATATATCATCACGAGAGAGGAGGGAGTTCGATGTCGGGTGAGGATGGAAGCTCTGGGACCTTTAAGAAGCAATCTGCATTATCATATGGTGGAATGGTGACTGCCTCTCCTTTAATTGGTTTGCCTGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACGCTCAGGGATCTTGAACTTGCAACGGATCGGTTCTCAGCAGAGAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACCGGGGAATGTTGATCAATGGAACAGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAAGCAGAGAAAGAGTTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTCGACATAAGAATCTTGTACGCCTTCTTGGATATTGCATCGAAGGAGTTCACAGGATGCTTGTGTATGAGTATGTGAATAACGGTAACTTAGAGCAATGGTTACATGGGGGCATGCGCCAACACGGGACACTTACCTGGGAGGCCCGCATGAAAGTTATAACTGGCACAGCCAAGGCGCTTTCATACTTGCATGAAGCAATAGAACCGAAAGTTGTTCATCGTGACATAAAATCTAGCAACATATTAATTGACGATGAGTTTAATGCGAAGGTTTCTGACTTCGGCTTGGCAAAACTCTTGGGTTCAGGAGAAAGTTACATAACAACTCGAGTCATGGGAACATTCGGTTATGTGGCACCAGAGTATGCTAATACTGGTTTGTTAAATGAGAAGAGCGATGTTTACAGCTTCGGTGTTCTACTTCTCGAAGCAGTTACTGGAAGGGACCCTGTTGACTATGCACGTCCTGCTAATGAGGTTAATCTTGTTGAATGGCTTAAGCTTATGGTCAGTGCTAAAAGAGCTGAGGAAGTCATCGACCTGAGCCTCGAAGTTAAACCATCGACACGGGAATTAAAACGTGCTCTTCTGGTTGCACTTAGGTGTCTTGATCCTGCTGCAGAAAAGAGGCCTAAAATGAGTCAGGTTGTGAGGATGTTTGAAGTTGATGAAAATCCATTCCGAGAGGATCGAAGGAACCGAAAGAGCCGAACTGGCAGCATGGAAATTGAAACCACAAAGGATCTTTCTGGTGGACTCAATGCTGAGAAGTCTGGGGATTCTGAAAGCCACAAACCGGAGGCGATTGAAAGAGTATGA 1539 0.4412 MPSNSSLNAQLSKKTTFLGLKLWVLIGIGVGAFIVLILCILSIWVMFWRKSKRSPNKHTASQIPNVSKDIKVDKVGVQSSYSHPENVYVQPFHEKASDKNPDKVLVQSDMSKCSDPENISQGSSIYHHERGGSSMSGEDGSSGTFKKQSALSYGGMVTASPLIGLPEFSHLGWGHWFTLRDLELATDRFSAENVIGEGGYGVVYRGMLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGGMRQHGTLTWEARMKVITGTAKALSYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESYITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKLMVSAKRAEEVIDLSLEVKPSTRELKRALLVALRCLDPAAEKRPKMSQVVRMFEVDENPFREDRRNRKSRTGSMEIETTKDLSGGLNAEKSGDSESHKPEAIERV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1773 512 MobiDBLite consensus disorder prediction 467 482 - -
Lele04g1773 512 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Lele04g1773 512 MobiDBLite consensus disorder prediction 467 512 - -
Lele04g1773 512 CDD STKc_IRAK 195 461 - -
Lele04g1773 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Lele04g1773 512 PANTHER OS01G0323000 PROTEIN 1 484 - -
Lele04g1773 512 MobiDBLite consensus disorder prediction 498 512 - -
Lele04g1773 512 Gene3D Transferase(Phosphotransferase) domain 1 265 477 - -
Lele04g1773 512 Pfam Protein kinase domain 191 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1773 512 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Lele04g1773 512 ProSiteProfiles Protein kinase domain profile. 189 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1773 512 FunFam Putative receptor-like protein kinase 171 264 - -
Lele04g1773 512 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1773 512 SUPERFAMILY Protein kinase-like (PK-like) 173 461 IPR011009 -
Lele04g1773 512 FunFam Putative receptor-like serine/threonine-protein kinase 265 475 - -
Lele04g1773 512 MobiDBLite consensus disorder prediction 112 144 - -
Lele04g1773 512 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1773 Lele-ChrLele04 22180758 22183570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1773 19 461 Trihelix Transcription Factor Family AT1G70460 38.530 2.24e-90 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele04g1773 Pkinase 8.2e-49 CL0016