Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1770 ATGTCTCATTCTCCCGGCGAGGAAATAAATAAACAAGACATTCCGAAAATTCAATCTTCAAAGGATAAGATTCCTGGAGGTGAAGTTTGGAATGATGGACTCATCTGTGCTTTTGAGTTCGTCTCTGTACCTCGGAGGAATAGATTAGCAGGAGTTCAAACTAATAGCTTATTAAGAACAAAAGGTACAGGAAACTGCTCGAACGATTCTTCTCCCTTAACAGTTGAATCTGGAGTTAATAAGAATCAATTACATCATCTCCATGGCAACAAAGAAAGGCTTCCAAGATGCTACTGGAGACCAATTGGTTGGGAAAGAATTTCAGAGCTTATACAGACAGTGCAGGTTGAAACAGAGTGGGCGTCATCAGAGTCTCATGGTTTCTCAGATGAAGAAACTGATGTCACTGTTGCAGATGTAGCAACTTCTTGCTGGGAACGGCCGGTTGGTCCCACTTGGTGGTGTCATGTGGATGCAGGTCATCCATTTATCAGTGCTTGGTTGAGCAGTGCTCAGTGGCTTCATCCAGCTATTAGCATTGCTTTGCGGGAAGAAAATAAACTAATCAGGGAACGAATGAGATATCTTCTATATGAGGTTCCCGTTCGGGTTGCTGGTGGACTGCTATTTGAACTTCTTGGACAGTCTGCGGGTGATCCTTTTGTTGAGGAAGATGGCATCCCCATTGTTCTACGAGCCTGGCAAGCAGCCAAGCACAAAACTTTTTGGTTGTTCCGTAAACGTGTATTTGGGGCTGCAAATGAAATTGAATTGATGTTTATGAACAGGAGGAATCATGAGGATTTACATCTTTTCAGTATAATATTGAACCAAGAAATCAGAAGGTTATCATCCCAGGAAGTGATCTTGCTAGAAGGAGTACGAGTACTAGAAATGTTAGAAGAGCAAGAAGCAGTTCGCACTCGCTTATTTACAATTCAAGATGTCATGCAAAGCACACTCCTTTCATGGTTACAGGATAGAAGCCTCAGAGTGACTCACAATTTAGGAGTGATTGGTGGAGGGGGTCTTGTTCTGTCCATCATAACTGGCCAGTTTGGTATAAATGCAGACGGAATACCTGGAGCTGATCATGCTCCCTATGCATTTGCTCTATTCTCAGGCCTCCTCGTTTTATTAGGAGTTCTACACATTGGAATTGGATTGCTTTGTCTTGGGCTGAAGAAACCCATTGTGGAAGAAAATGTTACAGTCAGAAAACTGGAACTTCAAGAGCTCGTCAAGATGTTTCAACATGAAGCAGAATCTCATGCACAAGTGCGAAAAACTATACAAACCCATGTTTTGAACCCAAAATGCAGAAATACCATGGATGAACCCCTTCTTCTCTCCAAGAAACGAGGAGTGGTCGCAGAATCATCAAGCAGGCCAGCATCCCTAAGAGAGCTTAACTCATCTTACATCGATCTTATCACCAATGAAGAAATCATTCAGATCATTACCACACCCAAGACTAGCCCTTCTTATTTGAACCTCATAGCCAACTTGAACAGAAGAAAGAACATCGTCCATCGCTCACATTCTGCACCATCAGTTTTCACTGAAGCCAGAGGAGGAAATGGTCACGATTCCTCTGACCTCAGAATTACACAAACAACATCACCAGCAATAGTAAGGTTATCCTTTATTGGTGTCATCTTGTATGTGGCAACTGGGGTTTTAGTTTACTTGGTAAGTGGGAGTTTCAAGGGAAAATCCACTTACAAGCCTGTGGATGCTGTGTACTTCACAGTGGTAACTCTCTGCACAATAGGATATGGTGATATTGTACCAGACACAGCATTCACCAAAATATTTACCTGTGGGTTCATTCTGGTAGGTTTCGGATTCATCGGCATTCTGCTGAATGGCTTAGTCACCTACGTTTGTGATAGACAAGAGGAAATGTTACTGAGTGCCATGGATGAGAATAGATTCAATACACTAGTTAGATCATATATGGTAGACAAAGAGAAAGGAAGAATGAGGATACGAACCAAAGTGTGTCTAGCTTTGGCAGTGGTTGTTTGTTGCATTGCTATAGGAACAATTTGTGCTCGCTACCTTGAGAACTTGGATTGGCTGGACAGTTTTTATCTTGCCGTTACTTCTGTTACAACAGTGGGTTATGGGGATTATGCTTTTACTACTGAGTGGGGAAGGTGTTTTGCATCATTATGGCTGTTAGTGAGCACATTGGCTGTCGGCAGGGCCTTTCTGTACCTAACTGAATACAGTATTGACAAGAGAAATCGTACTATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCAGATTTAGTGGCCGCCGACCTTGACAACGATGGATCAATCAGCAAGTCTGAATTTGTCATTTATAAGCTTAAGGAGATGGGGAAGATAGCTGAGAATGACATTCTACAAATAGGCAAACAATTTGACGCGTTGGACAGTACTCAATGTGGCAAGATTACTCTTGCTGACCTAATGGAAACTGCCTAA 2484 0.4219 MSHSPGEEINKQDIPKIQSSKDKIPGGEVWNDGLICAFEFVSVPRRNRLAGVQTNSLLRTKGTGNCSNDSSPLTVESGVNKNQLHHLHGNKERLPRCYWRPIGWERISELIQTVQVETEWASSESHGFSDEETDVTVADVATSCWERPVGPTWWCHVDAGHPFISAWLSSAQWLHPAISIALREENKLIRERMRYLLYEVPVRVAGGLLFELLGQSAGDPFVEEDGIPIVLRAWQAAKHKTFWLFRKRVFGAANEIELMFMNRRNHEDLHLFSIILNQEIRRLSSQEVILLEGVRVLEMLEEQEAVRTRLFTIQDVMQSTLLSWLQDRSLRVTHNLGVIGGGGLVLSIITGQFGINADGIPGADHAPYAFALFSGLLVLLGVLHIGIGLLCLGLKKPIVEENVTVRKLELQELVKMFQHEAESHAQVRKTIQTHVLNPKCRNTMDEPLLLSKKRGVVAESSSRPASLRELNSSYIDLITNEEIIQIITTPKTSPSYLNLIANLNRRKNIVHRSHSAPSVFTEARGGNGHDSSDLRITQTTSPAIVRLSFIGVILYVATGVLVYLVSGSFKGKSTYKPVDAVYFTVVTLCTIGYGDIVPDTAFTKIFTCGFILVGFGFIGILLNGLVTYVCDRQEEMLLSAMDENRFNTLVRSYMVDKEKGRMRIRTKVCLALAVVVCCIAIGTICARYLENLDWLDSFYLAVTSVTTVGYGDYAFTTEWGRCFASLWLLVSTLAVGRAFLYLTEYSIDKRNRTIAKWILHKKITLSDLVAADLDNDGSISKSEFVIYKLKEMGKIAENDILQIGKQFDALDSTQCGKITLADLMETA 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1770 827 Gene3D - 638 767 - -
Lele04g1770 827 ProSitePatterns EF-hand calcium-binding domain. 772 784 IPR018247 -
Lele04g1770 827 SUPERFAMILY Voltage-gated potassium channels 543 628 - -
Lele04g1770 827 FunFam Two-pore potassium channel 2-like 646 770 - -
Lele04g1770 827 PANTHER MAGNESIUM TRANSPORTER CORA-LIKE FAMILY PROTEIN 244 287 - -
Lele04g1770 827 MobiDBLite consensus disorder prediction 1 23 - -
Lele04g1770 827 Gene3D - 542 637 - -
Lele04g1770 827 PRINTS Two pore domain K+ channel signature 586 614 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele04g1770 827 PRINTS Two pore domain K+ channel signature 706 715 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele04g1770 827 FunFam Two-pore potassium channel 2-like 543 639 - -
Lele04g1770 827 SUPERFAMILY EF-hand 770 825 IPR011992 -
Lele04g1770 827 Pfam Ion channel 552 629 IPR013099 -
Lele04g1770 827 Pfam Ion channel 674 743 IPR013099 -
Lele04g1770 827 SUPERFAMILY Voltage-gated potassium channels 658 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1770 Lele-ChrLele04 22162886 22170501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1770 510 825 Ion Channels AT4G18160 52.366 1.37e-101 320