Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1761 ATGGAAGGGGATAATCGTCAAGAACAAGATCATAAAGGGATGAATCAAACTACTATCAAGCCAAGCATTAATGATGTCCCAAAAGCTGTTTCTCCAGTTTCTTTTGCAGCTACTACTGATCAGGAAGAAAACGTCCGGCGACCCCGTGGCCGGCCGGCCGGATCCAAGAATAAGCCGAAGCCACCGATTATCGTCACTAGGGATAGCGCAAATGCCCTAAGAGCTCATGCACTGGAAGTGACTTCTGGGTGTGATGTCAATGAAAGTTTGCTCAACTTTGCAAGAAGAAAGCAGAGAGGGATTTGTATTCTCAGTGGAACTGGTTGTGTCACAAATGTAACACTGCGTCAGTTAGCTTCTTCTGGTGCAACAGTCACACTCCACGGTAGGTTTGAGATTCTCTCTCTTCTGGGGTCGATTCTGCCGCGGCTGGCTCCACCGGCGATCACCGGACTGAATATTTACCTTGCCGGAGCTCAGGGGCAGATTCTGGGTGGTGCTGTGGTGGGTGCTCTGGTTGCTTCTGGACCTGTGGTGATTATGGCTGCTTCATTCATGAATGCTACTTTTGATCGTCTTCCATTAATGGAGGACGACGAGATTATTGCTCAGAATCATCAGCATTACCAGAATAACGGTCGAAGCCATCATCATCTTCATCATCATCACCTTGATGACTCAGATTTGTACGGAATGCCTCAGAACTTGCTCACTAATGGCACAATCCCTCCTGAGATATATTCATGGACTACTCCGGGGCGTAACTTCTCCAAAGCTTGA 780 0.4782 MEGDNRQEQDHKGMNQTTIKPSINDVPKAVSPVSFAATTDQEENVRRPRGRPAGSKNKPKPPIIVTRDSANALRAHALEVTSGCDVNESLLNFARRKQRGICILSGTGCVTNVTLRQLASSGATVTLHGRFEILSLLGSILPRLAPPAITGLNIYLAGAQGQILGGAVVGALVASGPVVIMAASFMNATFDRLPLMEDDEIIAQNHQHYQNNGRSHHHLHHHHLDDSDLYGMPQNLLTNGTIPPEIYSWTTPGRNFSKA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1761 259 PIRSF ESCAROLA 1 257 IPR014476 GO:0003680
Lele04g1761 259 ProSiteProfiles PPC domain profile profile. 70 208 IPR005175 -
Lele04g1761 259 FunFam AT-hook motif nuclear-localized protein 73 201 - -
Lele04g1761 259 SUPERFAMILY AF0104/ALDC/Ptd012-like 70 196 - -
Lele04g1761 259 CDD DUF296 74 185 IPR005175 -
Lele04g1761 259 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 215 IPR014476 GO:0003680
Lele04g1761 259 Gene3D - 73 208 - -
Lele04g1761 259 MobiDBLite consensus disorder prediction 1 63 - -
Lele04g1761 259 Pfam Plants and Prokaryotes Conserved (PCC) domain 74 186 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1761 Lele-ChrLele04 22118162 22118941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1761 9 258 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 62.000 1.34e-93 274