Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1753 ATGACTGTGGCGATCCCAGCAGGCGCACCTTCCACAACTGTTGAAAGGATCCCACTTCCGTATTCTCTTCTCTCCGAATTCTCCGAGCACTGTTTGATCATCGATGACAGACCCAAGTTGAATCTTACCAAAGAGGAGGTGCAGAAGAAGCTCCAATCGGAGAATATTCCAGCTTCTAAAGTTATTAAGCTTTCGAAGCTTCAGTCTAATTATCGTCCATTTGAAGCTAAGCGGAAGCTCTGTGGTTCTTACCACACGTTTTTCGCTGATAAAGGGGTGATTCCTCTGCTGCCACGGCTGTTGGGTAGGCATTTCTTTAAGAAGAAGAAGATTCCTGTGCCGGTGGATTTGAAGCATAAAAATTGGAAGGAGCAGATTGAGAGGGCATGCTCGTCGGCGTTCTTGTTCCTCAGGACAGGTACGTGTAGTGTGGTGAGAGTTGCTAAAGTGTCAATGGAAAGGGACGAGATTGTTGCTAATGTGACTGCGGCAATCAGTGGGATCGTGGAGCTCATGCCGAAAGGGTGGGGTTCTGTCCGGTCTTTTCATTTGAAATTGTTGGACTCGCTTGCGTTGCCGCTTTATCAGGCAATTCCTGATATGAAATTGAAGATTGAGGGAGCTAAGAGCAAAGAGGAAGAAGCCAAGGAAGAGGATGGAGATATTGTGAAAGATGAGGCTAAGAAGGATCTTAAAATTAGTAAGAGGAAGGGTAGGATCCATGAAGTTCGGTACATGGATGATAATATAGGTCATGAACTCAGTCAAGATGAGTCAGATGTTGAGCAAGATGGGGATGCGGAAGAAGAAGAAGATAATGAGAATGATGAAATGAATATTGAACCAGTGGTGGATAAGAAGAAAAGGAAAGGATCAAAAACTAACAAAAGGGTTCTTAGTGAGCTGAATAGTGAGAAAAAATTGAAGAAGGCAGCCAAGTACAAGGATAAAAGTAAGAAAGATAGGTCGTCTTCTAAGAGAAAGAAGGAAAATGATTTACCTGCTAAGGATGAAGTTTCTGGCCAGAAGAAGAAGAAGGAAAGTGAAGAAGTGAAATTGAATGCTGAAGCTGCAATTGATGAGAGAATGTTGAGAACAGAATCCAATATTCTTTCAGTTGAGAGTTTGGTCCTACATGCACTTGAAACCTCCATTTTGTTTTGTTTCGTTGTTTTGACCTAA 1182 0.4264 MTVAIPAGAPSTTVERIPLPYSLLSEFSEHCLIIDDRPKLNLTKEEVQKKLQSENIPASKVIKLSKLQSNYRPFEAKRKLCGSYHTFFADKGVIPLLPRLLGRHFFKKKKIPVPVDLKHKNWKEQIERACSSAFLFLRTGTCSVVRVAKVSMERDEIVANVTAAISGIVELMPKGWGSVRSFHLKLLDSLALPLYQAIPDMKLKIEGAKSKEEEAKEEDGDIVKDEAKKDLKISKRKGRIHEVRYMDDNIGHELSQDESDVEQDGDAEEEEDNENDEMNIEPVVDKKKRKGSKTNKRVLSELNSEKKLKKAAKYKDKSKKDRSSSKRKKENDLPAKDEVSGQKKKKESEEVKLNAEAAIDERMLRTESNILSVESLVLHALETSILFCFVVLT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1753 393 SUPERFAMILY Ribosomal protein L1 15 195 IPR023674 -
Lele04g1753 393 CDD Ribosomal_L1 15 194 IPR028364 -
Lele04g1753 393 FunFam Ribosomal protein L1p/L10e family 40 131 - -
Lele04g1753 393 MobiDBLite consensus disorder prediction 247 351 - -
Lele04g1753 393 MobiDBLite consensus disorder prediction 259 278 - -
Lele04g1753 393 Gene3D - 40 132 IPR016095 -
Lele04g1753 393 Coils Coil 198 218 - -
Lele04g1753 393 MobiDBLite consensus disorder prediction 295 351 - -
Lele04g1753 393 Pfam Ribosomal protein L1p/L10e family 13 189 IPR028364 -
Lele04g1753 393 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 37 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1753 Lele-ChrLele04 22069328 22071019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1753 83 185 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 32.039 7.52e-11 59.7