Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1742 ATGGATGTCACCAACAAGTCCCAAAGTCGCTTCACTCTGGGCCGCCAATCCTCTAAGGCACCGGAACGCCGCCACTCCGGCGATGACATTGCGTCGGAGGCGTTGGACTCGAGCGTTAGGTTGATGTACTTGGCGAATGACGGGGATTTGGATGGAATCAAGGAGCTTTTGGATTCTGGAAGTGATGTCAATTTCAGAGATATTGATGGCCGCACCGCTTTGCACGTCGCCGCGTGTCAGGGTCTCACCGATGTTGTTGAAATGTTAATCCACAGGGGTGCTGAGGTCGACCCAAAGGACCGGTGGGGCAGCACGCCTCTAGTAGATGCAATGTACTACAAAAATCATGATGTTGTAAAACTTTTGGAGAACCAAGGAGCAAAACCTCCGATGGCTTCCATGCATGTCCAAAATGTCCGTCCAGTCCCAGAATATGAGATTAACCCTTCTGAACTCGATTTCACAAATAGTGTTCGCATAACAAAGTTTGAGGCTTTGTCTGCCCACATCACTTTGTTTATTCAGCTCACACTCCTAAAGTTTGAGCATTTTCTTCCTCACAGAAAAGCATTTCACGATGAGCTTGCGTTACTTCAAAAATTACGGCATCCAAATGTAGTCCAATTTTTAGGTGCTGTAACACAGAGCACCCCAATGATGATTGTCACAGAATATCTACCTCAGGGAGATCTTCGAGCCTACTTGAAAAGGAGAGGTGCATTAAAACCAATAACGGCTGTGAAGTTTGCACTTGACATTGCTAGGTCTATCATAAATATACTGCGGGATGATTCTGGGCATCTGAAAGCTGCTGACTTTGGGGTTAGCAAGTTGCTCAAAGTTGCAAAAACTGTCAAAGAAGACAAACCTGTGACTAGCGAGGATACTTCTTGGCGCTATGTTGCTCCAGAGGTCTATAAAAATGAGGAGTATGATATCAAAGTAGATGTCTTTTCATTCGCTCTAATATTACAGGAGGATTGTAACTCTAGATGCTTCATGAATCTGAGGGCCTTGTTGGGAAATCGGACGAATCCAGGAAGCCGATCATCTAGGTTGATGACTTGA 1068 0.4551 MDVTNKSQSRFTLGRQSSKAPERRHSGDDIASEALDSSVRLMYLANDGDLDGIKELLDSGSDVNFRDIDGRTALHVAACQGLTDVVEMLIHRGAEVDPKDRWGSTPLVDAMYYKNHDVVKLLENQGAKPPMASMHVQNVRPVPEYEINPSELDFTNSVRITKFEALSAHITLFIQLTLLKFEHFLPHRKAFHDELALLQKLRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRAYLKRRGALKPITAVKFALDIARSIINILRDDSGHLKAADFGVSKLLKVAKTVKEDKPVTSEDTSWRYVAPEVYKNEEYDIKVDVFSFALILQEDCNSRCFMNLRALLGNRTNPGSRSSRLMT 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1742 355 Gene3D Transferase(Phosphotransferase) domain 1 176 257 - -
Lele04g1742 355 Gene3D Transferase(Phosphotransferase) domain 1 258 345 - -
Lele04g1742 355 Pfam Protein tyrosine and serine/threonine kinase 187 326 IPR001245 GO:0004672|GO:0006468
Lele04g1742 355 FunFam serine/threonine-protein kinase STY46-like 147 227 - -
Lele04g1742 355 Pfam Ankyrin repeats (3 copies) 41 129 IPR002110 GO:0005515
Lele04g1742 355 PIRSF ILK 1 336 - -
Lele04g1742 355 SUPERFAMILY Ankyrin repeat 40 133 IPR036770 -
Lele04g1742 355 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 119 326 - -
Lele04g1742 355 SMART ANK_2a 102 131 IPR002110 GO:0005515
Lele04g1742 355 SMART ANK_2a 69 98 IPR002110 GO:0005515
Lele04g1742 355 SMART ANK_2a 36 65 IPR002110 GO:0005515
Lele04g1742 355 MobiDBLite consensus disorder prediction 1 29 - -
Lele04g1742 355 FunFam Integrin-linked protein kinase family 21 145 - -
Lele04g1742 355 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Lele04g1742 355 SUPERFAMILY Protein kinase-like (PK-like) 184 327 IPR011009 -
Lele04g1742 355 MobiDBLite consensus disorder prediction 1 16 - -
Lele04g1742 355 Gene3D - 3 140 IPR036770 -
Lele04g1742 355 ProSiteProfiles Ankyrin repeat profile. 36 68 IPR002110 GO:0005515
Lele04g1742 355 ProSiteProfiles Protein kinase domain profile. 119 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1742 355 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1742 Lele-ChrLele04 21930685 21936592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1742 1 328 MAP Kinase Kinase Kinase AT3G58760 61.708 2.50e-146 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lele04g1742 PK_Tyr_Ser-Thr 1.6e-23 CL0016