Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1736 ATGGACAATCATGAAAACTCTGATAACTATATTCTGACCAATACTTCTACACTTCTCAATGCCTCTGTCATAGATTCACAACTGTACTCAACGGCTCGCATATCTCCTCTTTCTCTCACATATTATGGACTCTGTCTTTTGAATGGAAACTACACTTTGAAGCTTCACTTCGCGGAGATTTTGTTCTTGAATGATAAATCATATTACAGTCTTGGAAGGAGGATATTTGATGTCTACATCCAGTTCTCAGGTACACCTGATTTTATAAGCCTCCGAGAAAGCATGTCAATTCATGGTCAATGTCGTGGTTCATCTAGTTCAGGCGTTGAAGTTCATTTGCAACTATCTAGTGTATCCTTGACTCTCAGGCGAGACACTAATTCAGTCTTGCGATGCAATCTCTTCTTCTCGCTTAACATATATTTATCTTCTTTTATAGTGATTGCATTTTGTCCAAACAATAATGAAGTGCACATTTATAGATTGTCGGAAGACAAATGGGAAAAAGCTCATGTTCTTCAAAAGCATGACCAAGTAGTTTGTGGGTTGGACTGGAGTAATAAATCAAACAAGATAGTTACTGCATCCCATGATCGCAGTTCATATGTATGGAACTTTGAAGGATCAGAATGGGTGCCAACTCTCGTTGTGCTTAGGCTAAACCGTGCTGCTCTTTGTGTTCAGTGGAGTCCAAAAGAAAATAAGTTTGCAGTTGGAAGTGGGGCCAAAACTGTTTGTATATGCTACTATGAACAGGAGAACAACTGGTGGATCAGTAAACTCATCAGGAAAAGTCATGATTCTTCATTAATTGTTCAGCTTGATCTCTCTGTGTCCTGGACGTTTGGTGTCAAGTGGTCACCAAAGGGCACAACTTTAACTTACGCAGATTTCCGCTTAAGTTTTGTTGATATCTTTATGCTTTCCATTTATTGCTTGAGATTATACGTAATTTATCGACAAACTAGTGATTATGTTTTTGGTATATTAATTACAGGTCATAATTCGATTATATATTTTGTTACTGACATTGGTCGTCGTTCTCCTGAGACCCAAACTGTTCCTTATCGTGATTTGCCTCTCTGTGATGTTTGTTTTATTTCTGAGAACATGGTAATTGGTGTGGGATTTGACTGCGTCCCATTGGTCTTTGCTAAAGATGAAAGAGAAAAATGGTATGTGAACTTTTGCATATTTGAAATTCATCAGAAGTATTGGGGAAATAAGAGCAAGATCAGCAAGCTTAAAAGGATCACAGTTATGTTTGATCTGCAGTATACCGATATATTTGGAAGATATATTGGTCGATCCAGGGATGATGTGACAGTTGAAGCAGAAAGTGGGGGTTTTCATGACAAGTGTATAAATTGTGTGTTGCCTGTCAGGGGCCGTGGTACATTAATAAAGCGTTTCAGCACATCAGGTTTGGATGGAAGATTCATCATATGGGATTTGGAGAAGCAGCAAGATCTTGCTGCATACATTTTAGGTTCTCTTTAA 1500 0.3827 MDNHENSDNYILTNTSTLLNASVIDSQLYSTARISPLSLTYYGLCLLNGNYTLKLHFAEILFLNDKSYYSLGRRIFDVYIQFSGTPDFISLRESMSIHGQCRGSSSSGVEVHLQLSSVSLTLRRDTNSVLRCNLFFSLNIYLSSFIVIAFCPNNNEVHIYRLSEDKWEKAHVLQKHDQVVCGLDWSNKSNKIVTASHDRSSYVWNFEGSEWVPTLVVLRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWISKLIRKSHDSSLIVQLDLSVSWTFGVKWSPKGTTLTYADFRLSFVDIFMLSIYCLRLYVIYRQTSDYVFGILITGHNSIIYFVTDIGRRSPETQTVPYRDLPLCDVCFISENMVIGVGFDCVPLVFAKDEREKWYVNFCIFEIHQKYWGNKSKISKLKRITVMFDLQYTDIFGRYIGRSRDDVTVEAESGGFHDKCINCVLPVRGRGTLIKRFSTSGLDGRFIIWDLEKQQDLAAYILGSL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1736 499 Gene3D - 141 307 IPR015943 GO:0005515
Lele04g1736 499 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 173 207 - -
Lele04g1736 499 Pfam Malectin domain 9 81 IPR021720 -
Lele04g1736 499 ProSitePatterns Trp-Asp (WD) repeats signature. 192 206 IPR019775 -
Lele04g1736 499 Gene3D - 328 495 IPR015943 GO:0005515
Lele04g1736 499 Gene3D - 1 91 - -
Lele04g1736 499 ProSiteProfiles Trp-Asp (WD) repeats profile. 173 214 IPR001680 GO:0005515
Lele04g1736 499 PANTHER ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1 270 485 IPR017383 GO:0005885|GO:0015629|GO:0034314
Lele04g1736 499 SUPERFAMILY WD40 repeat-like 148 489 IPR036322 GO:0005515
Lele04g1736 499 SMART WD40_4 166 205 IPR001680 GO:0005515
Lele04g1736 499 SMART WD40_4 214 249 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1736 Lele-ChrLele04 21892760 21900069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1736 1 81 Receptor kinase-like Gene Family AT1G07650 60.976 3.50e-25 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1736 04 21892760 21900069 Lele04g1736 04 21892760 21900069 ECH
Lele01g1455 01 8995992 9012839 Lele04g1736 04 21892760 21900069 hybridization
Lele02g1764 02 21061341 21074074 Lele04g1736 04 21892760 21900069 hybridization