Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1698 ATGAGATGTAAGGAGATTGCTTCTGTGTGTGTTGGAATGTCCATGACAGTTCTGGAACGACTTGTTTTTGCTGCATTCATCTGCACTCTCGCTCTAGGAGGGTCAATAATGGGGACAATAGTGGGAGGGATGAAGGGACATAGATCAGAAGCAGGAATGCTTGATGGAGCTGGCAAAGGAGCAGTTTCAGGAGCCATTGCTGCTCTTGAATTACTGGATCATTTCATTGCTCAACATCATCATCATGAGCCTATGTCCAAGATTGCCCTATTAAGCAGTTTATTCAATGGGAAGGTCCTAATGGAATGGGTATATCCAGCCTATCAATGGCATATTGGGATACCTGAAACAATCTACAGAGAAGTATCAGATATTTATGATATGAGAGGAGTGCCAGGCTTGTCCCACAAATTGATTCAAAGCCTCCCTTTGCATCAATTCAACTCCGCACAAATGTTGGCTTCATACAATGAATCCTGCTGCTCCATTTGCTTCCTGGTAACTTTTCTATGTTGGTCAGAGATAATTTTTCACGTCGGTTTATCGAAAGCATATGAGGGTGGACTGGTCTTGAGGCCCATCTTGTAG 588 0.4337 MRCKEIASVCVGMSMTVLERLVFAAFICTLALGGSIMGTIVGGMKGHRSEAGMLDGAGKGAVSGAIAALELLDHFIAQHHHHEPMSKIALLSSLFNGKVLMEWVYPAYQWHIGIPETIYREVSDIYDMRGVPGLSHKLIQSLPLHQFNSAQMLASYNESCCSICFLVTFLCWSEIIFHVGLSKAYEGGLVLRPIL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1698 195 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 8 165 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1698 Lele-ChrLele04 21604021 21606266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1698 17 164 C3H Transcription Factor Family AT5G66070 26.115 1.00e-11 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1698 04 21604021 21606266 Lele04g1698 04 21604021 21606266 ECH
Lele01g1427 01 8787909 8790030 Lele04g1698 04 21604021 21606266 hybridization
Lele02g1715 02 20687717 20689909 Lele04g1698 04 21604021 21606266 hybridization