Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1697 ATGGGTCTGTGTTTGAGCAAAAGCAAAGGTTCAGAGCGAGAATATGATAGATACAGATCAGTGGGGGCAACTGCCGGAGCTCCGAATTACAAAACCCATGAACCCACTCCTCATCATCAGCCGTATCAATTGCCCGACAAGCCCTCTTCTAGGGCTTCGCCAAACCCTAATAAGCTCGGCCACAATGCGATTCTGGGGAAGCAATTCGAAGATGTGAAGCAATTTTACAAGACTGGGAAAGAACTGGGAAGGGGTCAATTTGGTGTGACCTATCTCTGCACTGAGATTTCAACTGGTAGACAATACGCTTGTGGTGAGCTCTTTGATCGGATTATTGCAAAGGGACATTACAGTGAAAGAGCAGCTGCTTCTATATGTAGACAGATTGTTAATGTTGTTCATATCTGTCACTTTATGGGTGTGATGCATAGAGATCTCAAGCCCGAGAATTTCTTGTTGTCCAGTAAGGATGAAAAAGCACTTCTCAAAGCCACAGATTTCGGTTTGTCCGTTTTCATCGAGGAAGGAAAGGTTTATCACGATATAGTTGGGAGTGCTTATTATGTTGCTCCTGAAGTCCTAAAGCGCAAATATGGGAAGGAGATCGACATATGGAGTGCCGGAGTGATACTGTATATCTTACTCAGCGGTGTACCTCCATTTTGGGCTGAGAATGAAAGGGGAATATTTGATGCCATTTTGGAAGGTCATATTGATTTTGAAAGTCAACCATGGCCAAGCATATCAAACAGTGCCAAGGATCTTGTTCGTAAGATGCTGACACAAGACCCGAAAAAGCGCATTACTTCTGCCCAGGTTCTTGAGCACCCATGGATTAGAGAAGATGGAAATGCATCTGACAAGCCGATAGATAGTGCGGTCCTTTCCAGAATGAAGCAATTTAGAGCAATGAACAAGCTAAAGAAACTTGCCCTGAAGGTCATTGCGGAGAATCTTTCTGAAGAAGAGATTCAAGGGCTGAAGTCAATGTTTATGAATATGGACACTGACAATAGCGGTACGATCACCTATGAGGAACTAAAGGAGGGATTGCAGAGACTTGGTTCAAAGCTCACAGAGGCTGAAGTGAAGCAGCTTATGGAAGCTGATGGTAGAATCAATTATGAAGAATTCTGCACGATGATGAGGAGTGGAAACCCACAAGGCAAGTTATTTTGA 1179 0.4377 MGLCLSKSKGSEREYDRYRSVGATAGAPNYKTHEPTPHHQPYQLPDKPSSRASPNPNKLGHNAILGKQFEDVKQFYKTGKELGRGQFGVTYLCTEISTGRQYACGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDEKALLKATDFGLSVFIEEGKVYHDIVGSAYYVAPEVLKRKYGKEIDIWSAGVILYILLSGVPPFWAENERGIFDAILEGHIDFESQPWPSISNSAKDLVRKMLTQDPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKSMFMNMDTDNSGTITYEELKEGLQRLGSKLTEAEVKQLMEADGRINYEEFCTMMRSGNPQGKLF 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1697 392 MobiDBLite consensus disorder prediction 1 60 - -
Lele04g1697 392 Pfam EF-hand domain pair 327 383 IPR002048 GO:0005509
Lele04g1697 392 SMART efh_1 326 354 IPR002048 GO:0005509
Lele04g1697 392 SMART efh_1 362 385 IPR002048 GO:0005509
Lele04g1697 392 Gene3D - 291 390 - -
Lele04g1697 392 Coils Coil 344 364 - -
Lele04g1697 392 Pfam Protein kinase domain 104 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1697 392 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
Lele04g1697 392 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Lele04g1697 392 SUPERFAMILY EF-hand 305 383 IPR011992 -
Lele04g1697 392 PANTHER SERINE/THREONINE-PROTEIN KINASE 104 368 - -
Lele04g1697 392 SMART serkin_6 76 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1697 392 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Lele04g1697 392 CDD EFh 327 383 IPR002048 GO:0005509
Lele04g1697 392 SUPERFAMILY Protein kinase-like (PK-like) 61 301 IPR011009 -
Lele04g1697 392 FunFam calcium-dependent protein kinase 1 107 286 - -
Lele04g1697 392 ProSiteProfiles Protein kinase domain profile. 1 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele04g1697 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Lele04g1697 392 CDD STKc_CAMK 75 278 - -
Lele04g1697 392 Gene3D Transferase(Phosphotransferase) domain 1 103 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1697 Lele-ChrLele04 21593343 21597116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g1697 322 388 EF-hand Containing Proteins AT3G20410 45.833 4.19e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele04g1697 Pkinase 5.1e-50 CL0016